All Classes

  • And
  • AnnotateVcfDb
  • AnnotateVcfDbMem
  • AnnotateVcfDbSorted
  • AnnotateVcfDbTabix
  • CountHet
  • CountHom
  • CountRef
  • CountVariant
  • DbMarker
  • DbNsfp
  • DbNsfpEntry
  • DbVcf
  • DbVcfMem
  • DbVcfSorted
  • DbVcfTabix
  • Div
  • Eq
  • Exists
  • Expression
  • ExpressionBinary
  • ExpressionUnary
  • FastaSample
  • Field
  • FieldConstant
  • FieldConstant.FieldConstantNames
  • FieldConstantFloat
  • FieldEff
  • FieldGenotype
  • FieldGenotypeSub
  • FieldIterator
  • FieldIterator.IteratorType
  • FieldLof
  • FieldNmd
  • FieldSub
  • Function
  • FunctionBoolGenotype
  • Ge
  • Gt
  • GwasCatalog
  • GwasCatalogEntry
  • GwasCatalogFileIterator
  • Has
  • In
  • Individual
  • IsHet
  • IsHom
  • IsRef
  • IsVariant
  • LangFactory
  • Le
  • Literal
  • Lt
  • MarkerFile
  • Match
  • Minus
  • Mod
  • Na
  • Neq
  • Not
  • NotMatch
  • Or
  • PedigreeDraw
  • PhastCons
  • Plus
  • QueryResult
  • SnpSift
  • SnpSiftBaseListener
  • SnpSiftBaseVisitor
  • SnpSiftCmdAlleleMatrix
  • SnpSiftCmdAnnotate
  • SnpSiftCmdCaseControl
  • SnpSiftCmdCaseControlSummary
  • SnpSiftCmdConcordance
  • SnpSiftCmdCovarianceMatrix
  • SnpSiftCmdDbNsfp
  • SnpSiftCmdExtractFields
  • SnpSiftCmdFilter
  • SnpSiftCmdFilterChrPos
  • SnpSiftCmdFilterGt
  • SnpSiftCmdGeneSets
  • SnpSiftCmdGt
  • SnpSiftCmdGwasCatalog
  • SnpSiftCmdHwe
  • SnpSiftCmdIntersect
  • SnpSiftCmdIntervals
  • SnpSiftCmdIntervalsIndex
  • SnpSiftCmdJoin
  • SnpSiftCmdPedShow
  • SnpSiftCmdPhastCons
  • SnpSiftCmdPrivate
  • SnpSiftCmdRemoveReferenceGenotypes
  • SnpSiftCmdRmInfo
  • SnpSiftCmdSort
  • SnpSiftCmdSplit
  • SnpSiftCmdTsTv
  • SnpSiftCmdVarType
  • SnpSiftCmdVcf2Tped
  • SnpSiftCmdVcf2Tped.UseMissing
  • SnpSiftCmdVcfCheck
  • SnpSiftCmdVcfOperator
  • SnpSiftCmdVcfOperator.Operator
  • SnpSiftLexer
  • SnpSiftListener
  • SnpSiftParser
  • SnpSiftParser.CompilationUnitContext
  • SnpSiftParser.ExpressionCompContext
  • SnpSiftParser.ExpressionCondContext
  • SnpSiftParser.ExpressionContext
  • SnpSiftParser.ExpressionExistsContext
  • SnpSiftParser.ExpressionLogicContext
  • SnpSiftParser.ExpressionParenContext
  • SnpSiftParser.ExpressionPlusContext
  • SnpSiftParser.ExpressionSetContext
  • SnpSiftParser.ExpressionTimesContext
  • SnpSiftParser.ExpressionUnaryContext
  • SnpSiftParser.FunctionCallContext
  • SnpSiftParser.LiteralBoolContext
  • SnpSiftParser.LiteralFloatContext
  • SnpSiftParser.LiteralIndexContext
  • SnpSiftParser.LiteralIntContext
  • SnpSiftParser.LiteralStringContext
  • SnpSiftParser.VarReferenceContext
  • SnpSiftParser.VarReferenceListContext
  • SnpSiftParser.VarReferenceListSubContext
  • SnpSiftVisitor
  • Summary
  • TestCasesAnnotate
  • TestCasesAnnotateCreateIndex
  • TestCasesAnnotateMem
  • TestCasesAnnotateTabix
  • TestCasesAnnotateUseIndex
  • TestCasesCaseControl
  • TestCasesConcordance
  • TestCasesDbNsfp
  • TestCasesDbNsfpDeleteCache
  • TestCasesExtractFields
  • TestCasesFilter
  • TestCasesFilterALL
  • TestCasesFilterChrPos
  • TestCasesFilterGt
  • TestCasesGeneSets
  • TestCasesGt
  • TestCasesGwasCatalog
  • TestCasesHwe
  • TestCasesIndex
  • TestCasesIntervals
  • TestCasesLd
  • TestCasesPrivate
  • TestCasesSort
  • TestCasesSplit
  • TestCasesVarType
  • TestCasesVcfCheck
  • TestCasesZzz
  • TestSuiteAll
  • Times
  • Value
  • VariantCounter
  • VcfHwe
  • VcfIndex
  • VcfIndexDataChromo
  • VcfIndexTree
  • VcfLd
  • Xor