Uses of Class
org.snpsift.fileIterator.DbNsfpEntry
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Packages that use DbNsfpEntry Package Description org.snpsift org.snpsift.fileIterator -
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Uses of DbNsfpEntry in org.snpsift
Fields in org.snpsift declared as DbNsfpEntry Modifier and Type Field Description protected DbNsfpEntry
SnpSiftCmdDbNsfp. currentDbEntry
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Uses of DbNsfpEntry in org.snpsift.fileIterator
Fields in org.snpsift.fileIterator with type parameters of type DbNsfpEntry Modifier and Type Field Description protected java.util.List<DbNsfpEntry>
DbNsfp. latestResults
Methods in org.snpsift.fileIterator that return DbNsfpEntry Modifier and Type Method Description DbNsfpEntry
DbNsfpEntry. cloneShallow()
Methods in org.snpsift.fileIterator that return types with arguments of type DbNsfpEntry Modifier and Type Method Description java.util.Collection<DbNsfpEntry>
DbNsfp. query(org.snpeff.interval.Variant variant)
Query tabix file to get dbNsfp entries (or cached entries from latest results)Methods in org.snpsift.fileIterator with parameters of type DbNsfpEntry Modifier and Type Method Description protected boolean
DbNsfp. match(org.snpeff.interval.Variant var, DbNsfpEntry dbEntry)
Does database entry 'DbNsfpEntry' match 'variant'?
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