- And
- AnnotateVcfDb
- AnnotateVcfDbMem
- AnnotateVcfDbSorted
- AnnotateVcfDbTabix
- CountHet
- CountHom
- CountRef
- CountVariant
- DbMarker
- DbNsfp
- DbNsfpEntry
- DbVcf
- DbVcfMem
- DbVcfSorted
- DbVcfTabix
- Div
- Eq
- Exists
- Expression
- ExpressionBinary
- ExpressionUnary
- FastaSample
- Field
- FieldConstant
- FieldConstant.FieldConstantNames
- FieldConstantFloat
- FieldEff
- FieldGenotype
- FieldGenotypeSub
- FieldIterator
- FieldIterator.IteratorType
- FieldLof
- FieldNmd
- FieldSub
- Function
- FunctionBoolGenotype
- Ge
- Gt
- GwasCatalog
- GwasCatalogEntry
- GwasCatalogFileIterator
- Has
- In
- Individual
- IsHet
- IsHom
- IsRef
- IsVariant
- LangFactory
- Le
- Literal
- Lt
- MarkerFile
- Match
- Minus
- Mod
- Na
- Neq
- Not
- NotMatch
- Or
- PedigreeDraw
- PhastCons
- Plus
- QueryResult
- SnpSift
- SnpSiftBaseListener
- SnpSiftBaseVisitor
- SnpSiftCmdAlleleMatrix
- SnpSiftCmdAnnotate
- SnpSiftCmdCaseControl
- SnpSiftCmdCaseControlSummary
- SnpSiftCmdConcordance
- SnpSiftCmdCovarianceMatrix
- SnpSiftCmdDbNsfp
- SnpSiftCmdExtractFields
- SnpSiftCmdFilter
- SnpSiftCmdFilterChrPos
- SnpSiftCmdFilterGt
- SnpSiftCmdGeneSets
- SnpSiftCmdGt
- SnpSiftCmdGwasCatalog
- SnpSiftCmdHwe
- SnpSiftCmdIntersect
- SnpSiftCmdIntervals
- SnpSiftCmdIntervalsIndex
- SnpSiftCmdJoin
- SnpSiftCmdPedShow
- SnpSiftCmdPhastCons
- SnpSiftCmdPrivate
- SnpSiftCmdRemoveReferenceGenotypes
- SnpSiftCmdRmInfo
- SnpSiftCmdSort
- SnpSiftCmdSplit
- SnpSiftCmdTsTv
- SnpSiftCmdVarType
- SnpSiftCmdVcf2Tped
- SnpSiftCmdVcf2Tped.UseMissing
- SnpSiftCmdVcfCheck
- SnpSiftCmdVcfOperator
- SnpSiftCmdVcfOperator.Operator
- SnpSiftLexer
- SnpSiftListener
- SnpSiftParser
- SnpSiftParser.CompilationUnitContext
- SnpSiftParser.ExpressionCompContext
- SnpSiftParser.ExpressionCondContext
- SnpSiftParser.ExpressionContext
- SnpSiftParser.ExpressionExistsContext
- SnpSiftParser.ExpressionLogicContext
- SnpSiftParser.ExpressionParenContext
- SnpSiftParser.ExpressionPlusContext
- SnpSiftParser.ExpressionSetContext
- SnpSiftParser.ExpressionTimesContext
- SnpSiftParser.ExpressionUnaryContext
- SnpSiftParser.FunctionCallContext
- SnpSiftParser.LiteralBoolContext
- SnpSiftParser.LiteralFloatContext
- SnpSiftParser.LiteralIndexContext
- SnpSiftParser.LiteralIntContext
- SnpSiftParser.LiteralStringContext
- SnpSiftParser.VarReferenceContext
- SnpSiftParser.VarReferenceListContext
- SnpSiftParser.VarReferenceListSubContext
- SnpSiftVisitor
- Summary
- TestCasesAnnotate
- TestCasesAnnotateCreateIndex
- TestCasesAnnotateMem
- TestCasesAnnotateTabix
- TestCasesAnnotateUseIndex
- TestCasesCaseControl
- TestCasesConcordance
- TestCasesDbNsfp
- TestCasesDbNsfpDeleteCache
- TestCasesExtractFields
- TestCasesFilter
- TestCasesFilterALL
- TestCasesFilterChrPos
- TestCasesFilterGt
- TestCasesGeneSets
- TestCasesGt
- TestCasesGwasCatalog
- TestCasesHwe
- TestCasesIndex
- TestCasesIntervals
- TestCasesLd
- TestCasesPrivate
- TestCasesSort
- TestCasesSplit
- TestCasesVarType
- TestCasesVcfCheck
- TestCasesZzz
- TestSuiteAll
- Times
- Value
- VariantCounter
- VcfHwe
- VcfIndex
- VcfIndexDataChromo
- VcfIndexTree
- VcfLd
- Xor