RDKit
Open-source cheminformatics and machine learning.
- a -
AbbreviationMatch() :
RDKit::Abbreviations::AbbreviationMatch
accumulateVotes() :
RDInfoTheory::InfoBitRanker
AcidBaseCatalogEntry() :
RDKit::MolStandardize::AcidBaseCatalogEntry
AcidBaseCatalogParams() :
RDKit::MolStandardize::AcidBaseCatalogParams
add() :
RDKit::CIPLabeler::Node
,
RDKit::CIPLabeler::PairList
,
RDKit::CIPLabeler::Rules
,
RDKit::FMCS::DuplicatedSeedCache
,
RDKit::FMCS::SeedSet
,
RDKit::FMCS::SubstructureCache
,
RDKit::RGroupData
,
RDKit::RGroupDecompData::UsedLabels
,
RDKit::RGroupDecomposition
addAgentTemplate() :
RDKit::ChemicalReaction
addAll() :
RDKit::CIPLabeler::PairList
addAtom() :
RDKit::FMCS::DuplicatedSeedCache::TKey
,
RDKit::FMCS::Graph
,
RDKit::FMCS::Seed
,
RDKit::RWMol
addAtoms() :
RDKit::RGroupDecompData
addAtomWithBookmark() :
RDKit::SubstanceGroup
addAtomWithIdx() :
RDKit::SubstanceGroup
addAttachPoint() :
RDKit::SubstanceGroup
addBinary() :
RDKit::CachedMolHolder
addBond() :
RDKit::FMCS::DuplicatedSeedCache::TKey
,
RDKit::FMCS::Graph
,
RDKit::FMCS::Seed
,
RDKit::RWMol
addBondWithBookmark() :
RDKit::SubstanceGroup
addBondWithIdx() :
RDKit::SubstanceGroup
addBracket() :
RDKit::SubstanceGroup
addCatalog() :
RDKit::FilterCatalogParams
addChild() :
Queries::Query< MatchFuncArgType, DataFuncArgType, needsConversion >
,
RDKit::FilterHierarchyMatcher
addConformer() :
RDKit::ROMol
addConformersToMol() :
RDKit::Trajectory
addCoreUserLabels() :
RDKit::RGroupDecompData
addCState() :
RDKit::SubstanceGroup
addCustomPropHandler() :
RDKit::MolPickler
addEdge() :
RDCatalog::HierarchCatalog< entryType, paramType, orderType >
addEntry() :
RDCatalog::Catalog< entryType, paramType >
,
RDCatalog::HierarchCatalog< entryType, paramType, orderType >
,
RDKit::FilterCatalog
addFeatureDef() :
RDKit::MolChemicalFeatureFactory
addFingerprint() :
RDKit::FPHolderBase
addFragsFromMol() :
RDKit::FragCatGenerator
addKey() :
RDKit::KeyFromPropHolder
,
RDKit::KeyHolderBase
addMol() :
RDKit::CachedMolHolder
,
RDKit::CachedSmilesMolHolder
,
RDKit::CachedTrustedSmilesMolHolder
,
RDKit::FixedMolSizeMolBundle
,
RDKit::FPHolderBase
,
RDKit::KeyFromPropHolder
,
RDKit::KeyHolderBase
,
RDKit::MolBundle
,
RDKit::MolHolder
,
RDKit::MolHolderBase
,
RDKit::SubstructLibrary
addMoleculeMetadata() :
RDKit::MolDraw2DSVG
addNode() :
RDKit::CIPLabeler::Digraph
addNonRingAtom() :
RDDepict::EmbeddedFrag
addParentAtomWithBookmark() :
RDKit::SubstanceGroup
addParentAtomWithIdx() :
RDKit::SubstanceGroup
addPattern() :
RDKit::ExclusionList
addPoint() :
RDFeatures::ImplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
addProductTemplate() :
RDKit::ChemicalReaction
addReactantTemplate() :
RDKit::ChemicalReaction
addReader() :
RDKit::MultiFPBReader
addRgroupData() :
RDKit::VarianceDataForLabel
addRing() :
RDKit::RingInfo
addSmiles() :
RDKit::CachedSmilesMolHolder
,
RDKit::CachedTrustedSmilesMolHolder
addSnapshot() :
RDKit::Trajectory
addTargetBondRingsIndeces() :
RDKit::FMCS::RingMatchTableSet
addVarianceData() :
RDKit::FingerprintVarianceScoreData
adjustBondEndsForLabels() :
RDKit::MolDraw2D_detail::DrawMol
adjustColons() :
RDKit::MolDraw2D_detail::AtomSymbol
adjustLineEndForHighlight() :
RDKit::MolDraw2D_detail::DrawMolMCH
adjustLineForString() :
RDKit::MolDraw2D_detail::DrawText
AdjustQueryParameters() :
RDKit::MolOps::AdjustQueryParameters
adjustStringRectsForSuperSubScript() :
RDKit::MolDraw2D_detail::DrawText
adjustToRemovedAtom() :
RDKit::SubstanceGroup
adjustToRemovedBond() :
RDKit::SubstanceGroup
align() :
RDKit::MolAlign::O3A
alignString() :
RDKit::MolDraw2D_detail::DrawText
,
RDKit::MolDraw2D_detail::DrawTextNotFT
allocateAtomCounts() :
RDKit::AdditionalOutput
allocateAtomToBits() :
RDKit::AdditionalOutput
allocateBitInfoMap() :
RDKit::AdditionalOutput
allocateBitPaths() :
RDKit::AdditionalOutput
AllowedAtomsValidation() :
RDKit::MolStandardize::AllowedAtomsValidation
And() :
RDKit::FilterMatchOps::And
AndQuery() :
Queries::AndQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
AngleBendContrib() :
ForceFields::MMFF::AngleBendContrib
,
ForceFields::UFF::AngleBendContrib
AngleConstraintContrib() :
ForceFields::MMFF::AngleConstraintContrib
,
ForceFields::UFF::AngleConstraintContrib
angleTo() :
RDGeom::Point2D
,
RDGeom::Point3D
,
RDGeom::PointND
annotateProperties() :
RDKit::Descriptors::Properties
append() :
RDKit::MolAlign::O3AConstraintVect
applyTautomer() :
RDKit::StructureCheck::StructCheckTautomer
areAtomsInSameRing() :
RDKit::RingInfo
areAtomsInSameRingOfSize() :
RDKit::RingInfo
areBondsInSameRing() :
RDKit::RingInfo
areBondsInSameRingOfSize() :
RDKit::RingInfo
argless() :
Rankers::argless< T >
AromaticAtomIterator_() :
RDKit::AromaticAtomIterator_< Atom_, Mol_ >
assign() :
RDNumeric::Matrix< TYPE >
,
RDNumeric::Vector< TYPE >
at() :
RDKit::FMCS::TArray2D< T >
,
RDKit::MolStandardize::TautomerEnumeratorResult
atEnd() :
RDKit::ForwardSDMolSupplier
,
RDKit::MolSupplier
,
RDKit::PDBMolSupplier
,
RDKit::ResonanceMolSupplier
,
RDKit::SDMolSupplier
,
RDKit::SmilesMolSupplier
,
RDKit::TDTMolSupplier
Atom() :
RDKit::Atom
atomBonds() :
RDKit::ROMol
AtomCompareFunctor() :
RDKit::Canon::AtomCompareFunctor
atomCoords() :
RDKit::MolDraw2D
atomicData() :
RDKit::atomicData
AtomicNum() :
RDKit::atomicData
AtomIterator_() :
RDKit::AtomIterator_< Atom_, Mol_ >
AtomKekulizeException() :
RDKit::AtomKekulizeException
atomMembers() :
RDKit::RingInfo
AtomMonomerInfo() :
RDKit::AtomMonomerInfo
atomNeighbors() :
RDKit::ROMol
AtomPairArguments() :
RDKit::AtomPair::AtomPairArguments< OutputType >
AtomPairAtomEnv() :
RDKit::AtomPair::AtomPairAtomEnv< OutputType >
AtomPairAtomInvGenerator() :
RDKit::AtomPair::AtomPairAtomInvGenerator
AtomPDBResidueInfo() :
RDKit::AtomPDBResidueInfo
AtomRingQuery() :
RDKit::AtomRingQuery
atomRings() :
RDKit::RingInfo
atomRingSizes() :
RDKit::RingInfo
atoms() :
RDKit::CIPLabeler::CIPMol
,
RDKit::ROMol
AtomSanitizeException() :
RDKit::AtomSanitizeException
AtomSymbol() :
RDKit::MolDraw2D_detail::AtomSymbol
atomSyms() :
RDKit::MolDraw2D
AtomValenceException() :
RDKit::AtomValenceException
AttribType() :
RDKit::SLNParse::AttribType
AugmentedAtom() :
RDKit::StructureCheck::AugmentedAtom
autoGetLabels() :
RDKit::RGroupDecompositionParameters
Generated on Mon Oct 24 2022 15:23:15 for RDKit by
1.9.4