Package picard.sam

Class DuplicationMetricsFactory


  • public class DuplicationMetricsFactory
    extends Object
    Factory class that creates either regular or flow-based duplication metrics. Supports MarkDuplicates with --flowMode
    • Constructor Detail

      • DuplicationMetricsFactory

        public DuplicationMetricsFactory()
    • Method Detail

      • createMetrics

        public static DuplicationMetrics createMetrics​(boolean flowMetrics)
        Create empty regular of flow duplication metrics
        Parameters:
        flowMetrics -
        Returns:
        DuplicationMetrics
      • createMetrics

        public static DuplicationMetrics createMetrics()
        Create non-flow duplication metrics
        Returns: