Package picard.sam

Class FlowBasedDuplicationMetrics

    • Field Detail

      • UNPAIRED_WITH_TLEN

        public long UNPAIRED_WITH_TLEN
      • UNPAIRED_DUPS_WITHOUT_TLEN

        public long UNPAIRED_DUPS_WITHOUT_TLEN
      • UNPAIRED_DUPS_WITH_TLEN

        public long UNPAIRED_DUPS_WITH_TLEN
      • UNPAIRED_DUP_RATE_WITHOUT_TLEN

        public Double UNPAIRED_DUP_RATE_WITHOUT_TLEN
        The fraction of duplicated reads out of all reads with exact fragment length unknown
      • UNPAIRED_DUP_RATE_WITH_TLEN

        public Double UNPAIRED_DUP_RATE_WITH_TLEN
        The fraction of duplicated reads out of all reads with exact fragment length known
    • Constructor Detail

      • FlowBasedDuplicationMetrics

        public FlowBasedDuplicationMetrics()