Package picard.sam
Enum AbstractAlignmentMerger.UnmappingReadStrategy
- java.lang.Object
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- java.lang.Enum<AbstractAlignmentMerger.UnmappingReadStrategy>
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- picard.sam.AbstractAlignmentMerger.UnmappingReadStrategy
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- All Implemented Interfaces:
Serializable
,Comparable<AbstractAlignmentMerger.UnmappingReadStrategy>
- Enclosing class:
- AbstractAlignmentMerger
public static enum AbstractAlignmentMerger.UnmappingReadStrategy extends Enum<AbstractAlignmentMerger.UnmappingReadStrategy>
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Enum Constant Summary
Enum Constants Enum Constant Description COPY_TO_TAG
DO_NOT_CHANGE
DO_NOT_CHANGE_INVALID
MOVE_TO_TAG
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description boolean
isKeepValid()
boolean
isPopulateOaTag()
boolean
isResetMappingInformation()
static AbstractAlignmentMerger.UnmappingReadStrategy
valueOf(String name)
Returns the enum constant of this type with the specified name.static AbstractAlignmentMerger.UnmappingReadStrategy[]
values()
Returns an array containing the constants of this enum type, in the order they are declared.
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Enum Constant Detail
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COPY_TO_TAG
public static final AbstractAlignmentMerger.UnmappingReadStrategy COPY_TO_TAG
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DO_NOT_CHANGE
public static final AbstractAlignmentMerger.UnmappingReadStrategy DO_NOT_CHANGE
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DO_NOT_CHANGE_INVALID
public static final AbstractAlignmentMerger.UnmappingReadStrategy DO_NOT_CHANGE_INVALID
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MOVE_TO_TAG
public static final AbstractAlignmentMerger.UnmappingReadStrategy MOVE_TO_TAG
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Method Detail
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values
public static AbstractAlignmentMerger.UnmappingReadStrategy[] values()
Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:for (AbstractAlignmentMerger.UnmappingReadStrategy c : AbstractAlignmentMerger.UnmappingReadStrategy.values()) System.out.println(c);
- Returns:
- an array containing the constants of this enum type, in the order they are declared
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valueOf
public static AbstractAlignmentMerger.UnmappingReadStrategy valueOf(String name)
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)- Parameters:
name
- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
IllegalArgumentException
- if this enum type has no constant with the specified nameNullPointerException
- if the argument is null
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isKeepValid
public boolean isKeepValid()
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isResetMappingInformation
public boolean isResetMappingInformation()
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isPopulateOaTag
public boolean isPopulateOaTag()
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