Package picard.metrics
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Interface Summary Interface Description PerUnitMetricCollector<BEAN extends htsjdk.samtools.metrics.MetricBase,HKEY extends Comparable,ARGTYPE> PerRecordCollector - An interface for classes that collect data in order to generate one or more metrics. -
Class Summary Class Description GcBiasMetrics MultiLevelCollector<METRIC_TYPE extends htsjdk.samtools.metrics.MetricBase,Histogram_KEY extends Comparable,ARGTYPE> MultiLevelCollector handles accumulating Metrics at different MetricAccumulationLevels(ALL_READS, SAMPLE, LIBRARY, READ_GROUP).MultilevelMetrics SAMRecordAndReference SAMRecordAndReferenceMultiLevelCollector<BEAN extends htsjdk.samtools.metrics.MetricBase,HKEY extends Comparable> SAMRecordMultiLevelCollector<BEAN extends htsjdk.samtools.metrics.MetricBase,HKEY extends Comparable> Defines a MultilevelPerRecordCollector using the argument type of SAMRecord so that this doesn't have to be redefined for each subclass of MultilevelPerRecordCollector