Interface HomologeneBuilder

    • Method Summary

      All Methods Instance Methods Abstract Methods 
      Modifier and Type Method Description
      void addOrthologueProperty​(java.lang.String key, java.lang.String value)
      add a property to the current Orthologue
      void addOrthoPairProperty​(java.lang.String key, java.lang.String value)
      add a property to the current OrthoPair
      void addTitle​(int taxonID, java.lang.String homologeneID, java.lang.String title)
      add title information to an Orthologue (this is not in enclosed in the Orthologue element because it comes completely separate in the Homologene data files.
      void endDB()
      end of data for DB
      void endGroup()
      end of data for group
      void endOrthologue()
      end of data for this Orthologue
      void endOrthoPair()
      end of data for this OrthoPair
      HomologeneDB getDB()
      retrieve the DB that has just been built
      void startDB()
      indicates start of data for a HomologeneDB
      void startGroup()
      indicates start of data for a OrthoPairSet
      void startOrthologue()
      indicates start of data for an orthologue
      void startOrthoPair()
      indicates start of data for an OrthoPair