GenomeTools - manual page for GT-READJOINER(1)

## NAME

gt-readjoiner - Readjoiner: a string graph-based sequence assembler.

## SYNOPSIS

gt readjoiner [option …] tool [argument …]

## DESCRIPTION

-help

  display help and exit

-version

  display version information and exit

Please consult the Readjoiner manual for more information.

Tools:

- prefilter prepare the readset for Readjoiner

- overlap calculate suffix-prefix matches

- assembly construct string graph and output contigs

## REPORTING BUGS

Report bugs to https://github.com/genometools/genometools/issues.