# Options: -minidentity 80 -l 30 -seedlength 12 -extendxdrop -ii at1MB -q /local/kurtz/genometools/testsuite/../testdata/U89959_genomic.fas -r -outfmt alignment=70 polinfo -verify-alignment -history 60
# Fields: s. len, s. seqnum, s. start, strand, q. len, q. seqnum, q. start, score, editdist, % identity
32 1099 143 R 30 0 106365 44 6 80.65
Sbjct  143  cttgtttgggctcttcaggat-ctcttgtcaag  174
            ||| |||||||||||| | || || ||||| ||
Query  578  ctt-tttgggctcttccg-atgct-ttgtctag  607

# polishing(m=400,d=-600,p=30): 33/33, seed_on_start, seed_on_end
32 1013 180 R 30 0 100448 44 6 80.65
Sbjct  180   gcaagagtaatcctctattattatctccccca  211
             |||| | ||||||||||||| || | || |||
Query  6495  gcaacactaatcctctattacta-c-cctcca  6524

# polishing(m=400,d=-600,p=30): 32/32
31 986 284 R 32 0 97954 45 6 80.95
Sbjct  284   tatgt-taatatttgtattatggtttgtatta  314
             ||| | ||||||||||||| |  ||| |||||
Query  8987  tatttataatatttgtattgttttttttatta  9018

# polishing(m=400,d=-600,p=30): 32/32
31 139 93 R 30 0 97699 46 5 83.61
Sbjct  93    tttcttattcggaaaaaaaaaatgattggaa  123
             ||||||| |   || ||||||||||||||||
Query  9244  tttctta-taaaaataaaaaaatgattggaa  9273

# polishing(m=400,d=-600,p=30): 31/31
33 571 310 R 29 0 97107 44 6 80.65
Sbjct  310   ttcttcttcttctttcttaaacttttgcatcaa  342
             |||||||||||||| ||||   | ||||| |||
Query  9837  ttcttcttcttctt-ctta---tgttgcaccaa  9865

# polishing(m=400,d=-600,p=30): 33/33
31 31 0 R 31 0 93825 47 5 83.87
Sbjct  0      ctctg-tctctttcttcttcttcttcttcttc  30
              ||||  | |||||||||||| |||||| ||||
Query  13117  ctctcat-tctttcttcttcctcttctacttc  13147

# polishing(m=400,d=-600,p=30): 32/32, seed_on_start, seed_on_end
30 479 183 R 31 0 91402 46 5 83.61
Sbjct  183    aagaaaaaagaaaaaaaaagcaag-aaacat  212
              || ||||||||||||||||   || ||||||
Query  15540  aataaaaaagaaaaaaaaaattagcaaacat  15570

# polishing(m=400,d=-600,p=30): 31/31
32 1134 277 R 28 0 88553 42 6 80.00
Sbjct  277    atgtttggatgtggataagtatttgacgatta  308
              || | ||| | ||| |||| ||||||||||||
Query  18392  atttctgg-t-tgg-taag-atttgacgatta  18419

# polishing(m=400,d=-600,p=30): 32/32, seed_on_start, seed_on_end
32 950 310 R 28 0 85878 42 6 80.00
Sbjct  310    ttatgtaatgttttatgtggtttgagttgtaa  341
              ||| || | | | ||| |||||||||||||||
Query  21067  tta-gt-a-g-tctatctggtttgagttgtaa  21094

# polishing(m=400,d=-600,p=30): 32/32
32 1041 299 R 28 0 85878 42 6 80.00
Sbjct  299    ttatgtaatgttttatgtggtttgagttgtaa  330
              ||| || | | | ||| |||||||||||||||
Query  21067  tta-gt-a-g-tctatctggtttgagttgtaa  21094

# polishing(m=400,d=-600,p=30): 32/32
37 965 245 R 38 0 84004 54 7 81.33
Sbjct  245    ttttgttctnt-ctttttcaaaaacttatta-agctctt  281
              ||| ||||| | ||||||||||||||| ||| | || ||
Query  22931  tttcgttctttactttttcaaaaactt-ttacacctatt  22968

# polishing(m=400,d=-600,p=30): 39/39, seed_on_end
42 703 366 R 38 0 83361 56 8 80.00
Sbjct  366    ctgttttttttttctttttgttgttgatgttgtccttatttg  407
              ||||||||||||| ||||| || ||||| || |  | |||||
Query  23574  ctgttttttttttttttttttttttgat-tt-t-at-atttg  23611

# polishing(m=400,d=-600,p=30): 42/42, seed_on_start, seed_on_end
37 777 257 R 38 0 83360 54 7 81.33
Sbjct  257    tgttttttttttctttcttgtattgactctat-tttgg  293
              |||||||||||| ||| || | |||| | ||| |||||
Query  23575  tgttttttttttttttttttttttgattttatatttgg  23612

# polishing(m=400,d=-600,p=30): 38/38, seed_on_start, seed_on_end
31 351 283 R 29 0 83369 42 6 80.00
Sbjct  283    tgctctttttttttttttgttttaataattt  313
              || | ||||||||||||| ||||  | ||||
Query  23575  tg-t-tttttttttttttttttttttgattt  23603

# polishing(m=400,d=-600,p=30): 31/31, seed_on_start, seed_on_end
31 351 283 R 29 0 83369 42 6 80.00
Sbjct  283    tgctctttttttttttttgttttaataattt  313
              || | ||||||||||||| ||||  | ||||
Query  23575  tgtt-ttttttttttttt-tttttttgattt  23603

# polishing(m=400,d=-600,p=30): 31/31, seed_on_start, seed_on_end
31 351 283 R 29 0 83369 42 6 80.00
Sbjct  283    tgctctttttttttttttgttttaataattt  313
              || | ||||||||||||| ||||  | ||||
Query  23575  tgtttttttttttttttt-tttt-ttgattt  23603

# polishing(m=400,d=-600,p=30): 31/31, seed_on_start, seed_on_end
30 351 288 R 34 0 83358 46 6 81.25
Sbjct  288    tttttttttttttgttttaat---a-atttggtt  317
              ||||||||||||| |||| ||   | ||||||||
Query  23581  ttttttttttttttttttgattttatatttggtt  23614

# polishing(m=400,d=-600,p=30): 34/34, seed_on_end
30 351 288 R 33 0 83358 45 6 80.95
Sbjct  288    tttttttttttttgttttaat---a-atttggtt  317
              ||||||||||||| |||| ||   | ||||||||
Query  23582  ttttttttttttt-ttttgattttatatttggtt  23614

# polishing(m=400,d=-600,p=30): 34/34, seed_on_end
30 351 288 R 32 0 83358 44 6 80.65
Sbjct  288    ttttttttttttt---g-ttttaataatttggtt  317
              |||||||||||||   | ||||| || |||||||
Query  23583  ttttttttttttttttgatttta-ta-tttggtt  23614

# polishing(m=400,d=-600,p=30): 34/34, seed_on_end
30 351 288 R 31 0 83358 46 5 83.61
Sbjct  288    ttttttttttttt--g-ttttaataatttggtt  317
              |||||||||||||  | ||||| || |||||||
Query  23584  tttttttttttttttgatttta-ta-tttggtt  23614

# polishing(m=400,d=-600,p=30): 33/33, seed_on_end
30 351 288 R 30 0 83358 48 4 86.67
Sbjct  288    ttttttttttttt-g-ttttaataatttggtt  317
              ||||||||||||| | ||||| || |||||||
Query  23585  ttttttttttttttgatttta-ta-tttggtt  23614

# polishing(m=400,d=-600,p=30): 32/32, seed_on_end
34 859 197 R 31 0 77831 50 5 84.62
Sbjct  197    aactaaganncatatatatatatatatatatata  230
              || ||| |  ||| ||||||||||||||||||||
Query  29111  aa-taa-ac-catgtatatatatatatatatata  29141

# polishing(m=400,d=-600,p=30): 34/34
34 1701 303 R 36 0 77826 52 6 82.86
Sbjct  303    aa-aaatctt-tatatatatatatatatntatntat  336
              || ||| | | ||||||||||||||||| ||| |||
Query  29111  aataaaccatgtatatatatatatatatatatatat  29146

# polishing(m=400,d=-600,p=30): 36/36, seed_on_start, seed_on_end
34 1701 303 R 35 0 77824 51 6 82.61
Sbjct  303    aaaa-atctttatatatatatatatatntatntat  336
              |||  || | ||||||||||||||||| ||| |||
Query  29114  aaaccatgtatatatatatatatatatatatatat  29148

# polishing(m=400,d=-600,p=30): 35/35, seed_on_start, seed_on_end
30 1701 307 R 30 0 77820 48 4 86.67
Sbjct  307    atctttatatatatatatatatntatntat  336
              || | ||||||||||||||||| ||| |||
Query  29123  atatatatatatatatatatatatatatat  29152

# polishing(m=400,d=-600,p=30): 30/30, seed_on_start, seed_on_end
40 1524 237 R 42 0 77802 58 8 80.49
Sbjct  237    atatatatatatatatatatagtctttata-ta-a-tgtctta  276
              ||||||||||||||||||||| | | |||| || | ||  |||
Query  29129  atatatatatatatatatata-tatatataatagaatgaatta  29170

# polishing(m=400,d=-600,p=30): 43/43
37 1214 205 R 37 0 77807 65 3 91.89
Sbjct  205    atatatatatatatatatatatatatatatatata-tg  241
              ||||||||||||||||||||||||||||| ||| | ||
Query  29129  atatatatatatatatatatatatatata-atagaatg  29165

# polishing(m=400,d=-600,p=30): 38/38
30 1701 307 R 30 0 77818 48 4 86.67
Sbjct  307    atctttatatatatatatatatntatntat  336
              || | ||||||||||||||||| ||| |||
Query  29125  atatatatatatatatatatatatatatat  29154

# polishing(m=400,d=-600,p=30): 30/30, seed_on_start, seed_on_end
40 1524 237 R 40 0 77802 59 7 82.50
Sbjct  237    atatatatatatatatatatagtcttta-tataatgtctta  276
              ||||||||||||||||||||| | | || || ||||  |||
Query  29131  atatatatatatatatatata-tatataatagaatgaatta  29170

# polishing(m=400,d=-600,p=30): 41/41
37 1214 205 R 35 0 77807 63 3 91.67
Sbjct  205    atatatatatatatatatatatatatatatatatatg  241
              ||||||||||||||||||||||||||| ||| | |||
Query  29131  atatatatatatatatatatatatata-ataga-atg  29165

# polishing(m=400,d=-600,p=30): 37/37
30 1701 307 R 30 0 77816 48 4 86.67
Sbjct  307    atctttatatatatatatatatntatntat  336
              || | ||||||||||||||||| ||| |||
Query  29127  atatatatatatatatatatatatatatat  29156

# polishing(m=400,d=-600,p=30): 30/30
40 1524 237 R 38 0 77802 57 7 82.05
Sbjct  237    atatatatatatatatatatagtctttatataatgtctta  276
              ||||||||||||||||||||| | |  ||| ||||  |||
Query  29133  atatatatatatatatatata-tat-aatagaatgaatta  29170

# polishing(m=400,d=-600,p=30): 40/40, seed_on_start, seed_on_end
34 1214 205 R 32 0 77808 57 3 90.91
Sbjct  205    atatatatatatatatatatatatatatatatat  238
              ||||||||||||||||||||||||| ||| | ||
Query  29133  atatatatatatatatatatatata-ataga-at  29164

# polishing(m=400,d=-600,p=30): 34/34
32 1214 205 R 30 0 77808 53 3 90.32
Sbjct  205    atatatatatatatatatatatatatatatat  236
              ||||||||||||||||||||||| ||| | ||
Query  29135  atatatatatatatatatatata-ataga-at  29164

# polishing(m=400,d=-600,p=30): 32/32
31 357 287 R 32 0 77145 45 6 80.95
Sbjct  287    tga-attttcttcatggtacatttttctaaaa  317
              ||| ||| ||||| |   ||||||||||||||
Query  29796  tgatattatcttctttaaacatttttctaaaa  29827

# polishing(m=400,d=-600,p=30): 32/32, seed_on_start, seed_on_end
31 1542 430 R 32 0 74770 45 6 80.95
Sbjct  430    attgttg--taataaacttgtgaaagtgatttt  460
              ||| |||  |||| || || |||||||||||||
Query  32171  att-ttgattaatcaaattttgaaagtgatttt  32202

# polishing(m=400,d=-600,p=30): 33/33, seed_on_start, seed_on_end
36 1565 142 R 34 0 74565 49 7 80.00
Sbjct  142    ag-atcttcccaaatgttaagcaagataaaaaaaaca  177
              || || || |||||  ||||| || ||||||||||||
Query  32374  agaatttt-ccaaaaattaag-aa-ataaaaaaaaca  32407

# polishing(m=400,d=-600,p=30): 37/37, seed_on_end
31 335 262 R 31 0 74523 50 4 87.10
Sbjct  262    atgaaat-aaagtgttctcaaaatgtttatga  292
              || |||| ||||| ||| ||||||||||||||
Query  32419  ataaaataaaagttttc-caaaatgtttatga  32449

# polishing(m=400,d=-600,p=30): 32/32
31 1059 469 R 31 0 74523 50 4 87.10
Sbjct  469    atgaaat-aaagtgttctcaaaatgtttatga  499
              || |||| ||||| ||| ||||||||||||||
Query  32419  ataaaataaaagttttc-caaaatgtttatga  32449

# polishing(m=400,d=-600,p=30): 32/32
31 1257 181 R 30 0 73427 43 6 80.33
Sbjct  181    atttaaaaattgctccccaaaaaaaaaaaat  211
              |||||||||||| |   |||||| ||| |||
Query  33516  atttaaaaattg-tgaacaaaaataaataat  33545

# polishing(m=400,d=-600,p=30): 31/31
31 1480 383 R 30 0 70767 43 6 80.33
Sbjct  383    ttttttactttttatcttttacttaggtctt  413
              ||| | | |||| || || ||||||||||||
Query  36176  tttataaattttcat-ttatacttaggtctt  36205

# polishing(m=400,d=-600,p=30): 31/31, seed_on_start, seed_on_end
28 635 184 R 32 0 66537 42 6 80.00
Sbjct  184    cactaagaaggaga-a-a-tttactggag-gc  211
              |||||||||||||| | |  || |||||| ||
Query  40404  cactaagaaggagatagaggttgctggagagc  40435

# polishing(m=400,d=-600,p=30): 32/32
34 155 13 R 29 0 63670 45 6 80.95
Sbjct  13     gttcatttccttgaaaacggttacagaattaggg  46
              |||| ||| ||| |||| ||  ||||||||||||
Query  43274  gttc-ttt-ctt-aaaatgg--acagaattaggg  43302

# polishing(m=400,d=-600,p=30): 34/34
35 870 405 R 36 0 52827 53 6 83.10
Sbjct  405    atttccctaaaaaataaacaaaaaaaaatgta--taa  439
              || | ||||||||| ||| |||||||||||||  |||
Query  54110  atgtacctaaaaaaaaaa-aaaaaaaaatgtacctaa  54145

# polishing(m=400,d=-600,p=30): 37/37
30 1397 172 R 31 0 51775 43 6 80.33
Sbjct  172    ctac-aaa-taaaatgggacaaaaaaaaagaa  201
              |||| ||| || | | ||| ||||||||||||
Query  55167  ctacgaaactagact-ggaaaaaaaaaaagaa  55197

# polishing(m=400,d=-600,p=30): 32/32, seed_on_start, seed_on_end
38 1403 175 R 34 0 49810 54 6 83.33
Sbjct  175    aaaaaagatcaaagagagagagagagagagagagagaa  212
              |||||| |  ||||||| |||| |||||||||||| ||
Query  57129  aaaaaa-a--aaagagatagagggagagagagaga-aa  57162

# polishing(m=400,d=-600,p=30): 38/38
36 1403 175 R 35 0 49809 50 7 80.28
Sbjct  175    aaaaaagatcaaagagagagagagagagagagagag  210
              |||||| |  | ||| |||| |||||||||||| ||
Query  57129  aaaaaaaaa-agagatagagggagagagagagaaag  57163

# polishing(m=400,d=-600,p=30): 36/36
30 1403 192 R 31 0 43282 52 3 90.16
Sbjct  192    gagagagagagagagagagaaaga-aaaaaa  221
              |||||||||||||||||||  ||| ||||||
Query  63660  gagagagagagagagagagtcagacaaaaaa  63690

# polishing(m=400,d=-600,p=30): 31/31
32 1403 190 R 32 0 43281 52 4 87.50
Sbjct  190    gagagagagagagagagagagaaagaaaaaaa  221
              |||||||||||||||||||  | | |||||||
Query  63660  gagagagagagagagagagtcagacaaaaaaa  63691

# polishing(m=400,d=-600,p=30): 32/32, seed_on_start, seed_on_end
33 1403 188 R 32 0 43281 53 4 87.69
Sbjct  188    gagagagagagagagagagagagaaagaaaaaa  220
              |||||||||||||||||||  ||| | ||||||
Query  63660  gagagagagagagagagagtcagaca-aaaaaa  63691

# polishing(m=400,d=-600,p=30): 33/33, seed_on_start, seed_on_end
32 1403 187 R 31 0 43281 51 4 87.30
Sbjct  187    agagagagagagagagagagagagaaagaaaa  218
              ||||||||||||||||||  ||| ||| ||||
Query  63661  agagagagagagagagagtcagacaaa-aaaa  63691

# polishing(m=400,d=-600,p=30): 32/32, seed_on_start, seed_on_end
31 1403 187 R 29 0 43281 45 5 83.33
Sbjct  187    agagagagagagagagagagagagaaagaaa  217
              ||||||||||||||||  ||| | ||| |||
Query  63663  agagagagagagagagtcagaca-aaa-aaa  63691

# polishing(m=400,d=-600,p=30): 31/31, seed_on_start, seed_on_end
32 442 118 R 34 0 43184 48 6 81.82
Sbjct  118    ctttcttcttctttgttttgg-ggt-tccagtct  149
              |||||||||||||| | ||||  || || |||||
Query  63755  ctttcttcttctttttgttggaagtctcaagtct  63788

# polishing(m=400,d=-600,p=30): 34/34, seed_on_start, seed_on_end
31 237 140 R 30 0 42784 43 6 80.33
Sbjct  140    gag-aagaaagtggcggctgaggaggagaa-ac  170
              ||| |||||||||||||  | ||| ||||| ||
Query  64159  gagtaagaaagtggcgg--g-ggaagagaacac  64188

# polishing(m=400,d=-600,p=30): 33/33, seed_on_start, seed_on_end
35 1275 281 R 34 0 40045 54 5 85.51
Sbjct  281    tttttttgccattgacaattttt-ccttcttccttc  315
              |||||||| |||| |  |||||| ||||||||||||
Query  66894  tttttttgtcatt-at-atttttgccttcttccttc  66927

# polishing(m=400,d=-600,p=30): 36/36
28 1894 15 R 32 0 37196 42 6 80.00
Sbjct  15     ataatc-caaaaaaaaaaaccat-a-t-tttt  42
              || ||| |||||||||||| ||| | | ||||
Query  69745  attatcacaaaaaaaaaaaacattaatctttt  69776

# polishing(m=400,d=-600,p=30): 32/32, seed_on_start, seed_on_end
30 323 367 R 30 0 27210 42 6 80.00
Sbjct  367    ttgttgaagaagtttatacata--aaa-agtta  396
              || || ||| ||||||||||||  ||| |||||
Query  79733  tt-tt-aag-agtttatacatatcaaacagtta  79762

# polishing(m=400,d=-600,p=30): 33/33
31 573 274 R 29 0 26867 42 6 80.00
Sbjct  274    ggttctttggtttggtttgtgtctctt-gatt  304
              || | ||||||||||||| | || ||| ||||
Query  80077  ggct-tttggtttggttt-t-tccctttgatt  80105

# polishing(m=400,d=-600,p=30): 32/32, seed_on_start, seed_on_end
33 859 211 R 31 0 20269 46 6 81.25
Sbjct  211    tatatatatatatatatataaagcaaacatgtt  243
              |||| ||||||||||||| ||| || | || ||
Query  86673  tata-atatatatatataaaaaacatatat-tt  86703

# polishing(m=400,d=-600,p=30): 33/33
36 1524 238 R 37 0 17254 52 7 80.82
Sbjct  238    tatatatatatatatatatagtct-ttatat-aatgtc  273
              ||||||||||||||||||||  || || | | ||| ||
Query  89682  tatatatatatatatatatatactattctcttaat-tc  89718

# polishing(m=400,d=-600,p=30): 38/38, seed_on_start, seed_on_end
35 1701 308 R 37 0 17259 51 7 80.56
Sbjct  308    tctt-tatatatatatatatatntat-ntattttttt  342
              |||  ||||||||||||||||| |||  |||| | ||
Query  89677  tctcctatatatatatatatatatatactattctctt  89713

# polishing(m=400,d=-600,p=30): 37/37, seed_on_end
34 1701 309 R 33 0 17259 49 6 82.09
Sbjct  309    ctttatatatatatatatatntatntattttttt  342
              || ||||||||||||||||| ||  |||| | ||
Query  89681  ctatatatatatatatatatata-ctattctctt  89713

# polishing(m=400,d=-600,p=30): 34/34, seed_on_end
36 124 120 R 32 0 8890 50 6 82.35
Sbjct  120    ttactatcttcttctccttcttcttcctcctcaatg  155
              || |||| ||||||||||||| |||| |||| | ||
Query  98051  tt-ctat-ttcttctccttctccttc-tcctta-tg  98082

# polishing(m=400,d=-600,p=30): 36/36, seed_on_start, seed_on_end
36 817 239 R 34 0 6628 49 7 80.00
Sbjct  239     gatgaagaagaagaagaagcacattgagactggaga  274
               || |||||||||||||||| | ||  |||  |||||
Query  100311  gaagaagaagaagaagaagaatat-aaga-gggaga  100344

# polishing(m=400,d=-600,p=30): 36/36, seed_on_start, seed_on_end
30 103 74 R 32 0 5954 44 6 80.65
Sbjct  74      cttcttcttcttcttct-cttc-taatcct-ag  103
               ||||||||||||||||| || | | ||| | ||
Query  100987  cttcttcttcttcttcttct-catgatcatcag  101018

# polishing(m=400,d=-600,p=30): 33/33, seed_on_start, seed_on_end
32 632 159 R 33 0 5968 47 6 81.54
Sbjct  159     tccaggtgt-ctcttcttcttcttcttcttctt  190
               |||  || | |||  ||||||||||||||||||
Query  100972  tccgagtctactcaacttcttcttcttcttctt  101004

# polishing(m=400,d=-600,p=30): 33/33, seed_on_start, seed_on_end
30 1024 109 R 32 0 5070 44 6 80.65
Sbjct  109     gagaagaagaagaagna-aaca-gaaggcgaa  138
               ||||||||||||||| | || | ||||  |||
Query  101871  gagaagaagaagaagaagaagaagaagaagaa  101902

# polishing(m=400,d=-600,p=30): 32/32, seed_on_start, seed_on_end
30 539 304 R 31 0 5078 43 6 80.33
Sbjct  304     act--aagagg-gaagattagaagaagaagaag  333
               |||  |||||  |||||  ||||||||||||||
Query  101864  actggaagagaagaaga--agaagaagaagaag  101894

# polishing(m=400,d=-600,p=30): 33/33, seed_on_start, seed_on_end
34 1903 3 R 34 0 5071 53 5 85.29
Sbjct  3       gaagagaacgaag--gaagaagaagaagaggaacga  36
               |||||||| ||||  |||||||||||||| ||| ||
Query  101868  gaagagaa-gaagaagaagaagaagaagaagaa-ga  101901

# polishing(m=400,d=-600,p=30): 36/36, seed_on_start, seed_on_end
37 953 112 R 39 0 5064 55 7 81.58
Sbjct  112     agcagataaagaag-agaagaagaagaa-aaggagaa-ac  148
               || |||  |||||| ||||||||||||| ||| |||| ||
Query  101870  ag-agaagaagaagaagaagaagaagaagaagaagaagac  101908

# polishing(m=400,d=-600,p=30): 40/40
36 20 7 R 37 0 5067 55 6 83.56
Sbjct  7       aagaaggaa-aagatg-agaagaagaagaagaagaa-aa  42
               ||| | ||| |||| | ||||||||||||||||||| ||
Query  101869  aag-a-gaagaagaagaagaagaagaagaagaagaagaa  101905

# polishing(m=400,d=-600,p=30): 39/39, seed_on_start, seed_on_end
35 1903 2 R 33 0 5068 53 5 85.29
Sbjct  2       agaag-agaacgaaggaagaagaagaagaggaacga  36
               ||||| |||| ||| |||||||||||||| ||| ||
Query  101872  agaagaagaa-gaa-gaagaagaagaagaagaa-ga  101904

# polishing(m=400,d=-600,p=30): 36/36, seed_on_start, seed_on_end
37 20 7 R 42 0 5062 58 7 82.28
Sbjct  7       aaga-aggaa-aagatg-agaagaagaagaagaagaa-a-ac  43
               |||| | ||| |||| | ||||||||||||||||||| | ||
Query  101869  aagagaagaagaagaagaagaagaagaagaagaagaagacac  101910

# polishing(m=400,d=-600,p=30): 42/42, seed_on_start, seed_on_end
35 1903 2 R 33 0 5065 53 5 85.29
Sbjct  2       agaag-agaacgaaggaagaagaagaagaggaacga  36
               ||||| |||| ||| |||||||||||||| ||| ||
Query  101875  agaagaagaa-gaa-gaagaagaagaagaagaa-ga  101907

# polishing(m=400,d=-600,p=30): 36/36, seed_on_start, seed_on_end
38 20 7 R 39 0 5060 59 6 84.42
Sbjct  7       aagaaggaa-aagatg-agaagaagaagaagaagaaaact  44
               ||||| ||| |||| | |||||||||||||||||| | ||
Query  101874  aagaa-gaagaagaagaagaagaagaagaagaagacacct  101912

# polishing(m=400,d=-600,p=30): 40/40, seed_on_start, seed_on_end
33 1903 2 R 33 0 5062 51 5 84.85
Sbjct  2       agaag-agaacgaaggaagaagaagaagagga-ac  34
               ||||| |||| ||| |||||||||||||| || ||
Query  101878  agaagaagaa-gaa-gaagaagaagaagaagacac  101910

# polishing(m=400,d=-600,p=30): 35/35, seed_on_start, seed_on_end
30 20 7 R 31 0 5065 49 4 86.89
Sbjct  7       aagaaggaa-aagatg-agaagaagaagaaga  36
               ||||| ||| |||| | |||||||||||||||
Query  101877  aagaa-gaagaagaagaagaagaagaagaaga  101907

# polishing(m=400,d=-600,p=30): 32/32, seed_on_start, seed_on_end
35 953 103 R 35 0 5065 49 7 80.00
Sbjct  103     gaagaactcagcagataaagaag-agaagaagaaga  137
               ||||||   || |||  |||||| ||||||||||||
Query  101873  gaagaaga-agaagaagaagaagaagaagaagaaga  101907

# polishing(m=400,d=-600,p=30): 36/36, seed_on_end
31 139 87 R 32 0 2624 45 6 80.95
Sbjct  87      gttaa--ttttcttattcggaaaaaaaaaatga  117
               |||||  ||||  || ||||||||||||| |||
Query  104317  gttaacgttttaataatcggaaaaaaaaa-tga  104348

# polishing(m=400,d=-600,p=30): 33/33
31 139 87 R 32 0 2624 45 6 80.95
Sbjct  87      gttaa--ttttcttattcggaaaaaaaaaatga  117
               |||||  ||||  || |||| ||||||||||||
Query  104317  gttaacgttttaataatcgg-aaaaaaaaatga  104348

# polishing(m=400,d=-600,p=30): 33/33
