diamond-aligner (2.2.5-1) unstable; urgency=medium

  * d/watch: consolidate Github template
  * New upstream version
  * Standards-Version: 4.7.4 (routine-update)
  * Remove Priority field (cme)
  * Drop 'Rules-Requires-Root: no' from d/control (routine-update)
  * Set upstream metadata fields: Bug-Database, Repository-Browse.
  * Build-Depends: libsqlite3-dev

 -- Andreas Tille <tille@debian.org>  Thu, 13 Aug 2026 16:29:14 +0200

diamond-aligner (2.1.14-1) unstable; urgency=medium

  * Fix build with CMake 4
    Closes: #1112842
  * d/watch: version=5
  * New upstream version
  * debputy lint --auto-fix (routine-update)

 -- Andreas Tille <tille@debian.org>  Fri, 17 Oct 2025 11:44:29 +0200

diamond-aligner (2.1.11-2) unstable; urgency=medium

  [ Gui-Yue ]
  * fix memcpy not defined on riscv64.  (Closes: #1099828)

 -- Étienne Mollier <emollier@debian.org>  Sun, 09 Mar 2025 10:47:09 +0100

diamond-aligner (2.1.11-1) unstable; urgency=medium

  * New upstream version 2.1.11
  * d/copyright: much needed copyright rehaul.
  * d/control: declare compliance to standards version 4.7.2.
  * d/control: add myself to uploaders.
  * typo.patch: fix typo caught by lintian.

 -- Étienne Mollier <emollier@debian.org>  Fri, 07 Mar 2025 22:44:54 +0100

diamond-aligner (2.1.9-2) unstable; urgency=medium

  * Team upload.

  [ Andreas Tille ]
  * Exclude i386 build from Salsa CI

  [ Étienne Mollier ]
  * d/rules: remove use of ld.gold.
    ld.gold is deprecated and not part of binutils anymore, causing
    diamond-aligner to fail to build from source.
    Thanks to Michael R. Crusoe (Closes: #1095338)
  * d/control: declare compliance to standards version 4.7.0.

 -- Étienne Mollier <emollier@debian.org>  Sun, 16 Feb 2025 11:26:11 +0100

diamond-aligner (2.1.9-1) unstable; urgency=medium

  * New upstream version

 -- Andreas Tille <tille@debian.org>  Wed, 07 Feb 2024 11:17:49 +0100

diamond-aligner (2.1.8-2) unstable; urgency=medium

  [ Dandan Zhang ]
  * Add LoongArch support

 -- Andreas Tille <tille@debian.org>  Sat, 19 Aug 2023 11:56:22 +0200

diamond-aligner (2.1.8-1) unstable; urgency=medium

  * New upstream version

 -- Andreas Tille <tille@debian.org>  Tue, 11 Jul 2023 17:22:50 +0200

diamond-aligner (2.1.3-1) unstable; urgency=medium

  * Team upload.
  * New upstream version. Finally fixes the arm64 build.

 -- Michael R. Crusoe <crusoe@debian.org>  Thu, 23 Feb 2023 17:31:41 +0100

diamond-aligner (2.1.2-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Michael R. Crusoe <crusoe@debian.org>  Mon, 20 Feb 2023 14:07:27 +0100

diamond-aligner (2.1.1-1) unstable; urgency=medium

  * Team Upload.
  * New upstream version. Closes: #1030360

 -- Michael R. Crusoe <crusoe@debian.org>  Mon, 20 Feb 2023 13:03:15 +0100

diamond-aligner (2.1.0-1) unstable; urgency=medium

  * New upstream version
  * Standards-Version: 4.6.2 (routine-update)

 -- Andreas Tille <tille@debian.org>  Wed, 01 Feb 2023 16:54:35 +0100

diamond-aligner (2.0.15-1) unstable; urgency=medium

  * Create sensible upstream tarball name when using uscan
  * New upstream version

 -- Andreas Tille <tille@debian.org>  Mon, 02 May 2022 12:17:22 +0200

diamond-aligner (2.0.14-1) unstable; urgency=medium

  * New upstream version
  * Add missing build dependency on dh addon.

 -- Andreas Tille <tille@debian.org>  Sun, 16 Jan 2022 16:20:52 +0100

diamond-aligner (2.0.13-1) unstable; urgency=medium

  * Team Upload.
  * New upstream version 2.0.13
  * Update manpage

 -- Nilesh Patra <nilesh@debian.org>  Sun, 31 Oct 2021 15:04:59 +0530

diamond-aligner (2.0.12-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Michael R. Crusoe <crusoe@debian.org>  Wed, 06 Oct 2021 15:45:53 +0200

diamond-aligner (2.0.11-1) unstable; urgency=medium

  * Team upload.

  [ Andreas Tille ]
  * Fix watchfile to detect new versions on github (routine-update)
  * New upstream version
  * Standards-Version: 4.6.0 (routine-update)

  [ Michael R. Crusoe ]
  * Autopkgtest: pass "--ignore-warnings" when needed due to a protein sequence
    that looks like a DNA sequence

 -- Michael R. Crusoe <crusoe@debian.org>  Tue, 14 Sep 2021 12:20:33 +0200

diamond-aligner (2.0.7-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Michael R. Crusoe <crusoe@debian.org>  Mon, 15 Feb 2021 09:29:10 +0100

diamond-aligner (2.0.6-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.5.1 (routine-update)

 -- Michael R. Crusoe <crusoe@debian.org>  Sun, 03 Jan 2021 14:45:31 +0100

diamond-aligner (2.0.5-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Spelling patch removed, it was merged upstream.

 -- Michael R. Crusoe <crusoe@debian.org>  Sat, 21 Nov 2020 19:56:55 +0100

diamond-aligner (2.0.4-2) unstable; urgency=medium

  * Team upload.
  * Remove mips64el from the arch list, it is not supported upstream

 -- Michael R. Crusoe <crusoe@debian.org>  Mon, 31 Aug 2020 16:12:52 +0200

diamond-aligner (2.0.4-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Added patch to fix some typos and minor grammatical errors
  * Fix cross-building with test invocation

 -- Michael R. Crusoe <crusoe@debian.org>  Mon, 31 Aug 2020 15:03:46 +0200

diamond-aligner (2.0.2-1) unstable; urgency=medium

  * New upstream version

 -- Andreas Tille <tille@debian.org>  Mon, 10 Aug 2020 23:37:19 +0200

diamond-aligner (0.9.35-1) unstable; urgency=medium

  * Run test suite verbosely (no --quiet option)
  * New upstream version

 -- Andreas Tille <tille@debian.org>  Sat, 20 Jun 2020 15:44:31 +0200

diamond-aligner (0.9.33-1) unstable; urgency=medium

  * New upstream version
    Closes: #959374
  * Remove sh4 from architecture list
    Closes: #959373
  * debhelper-compat 13 (routine-update)

 -- Andreas Tille <tille@debian.org>  Tue, 02 Jun 2020 11:06:15 +0200

diamond-aligner (0.9.32-2) unstable; urgency=medium

  * Fixed different build issues
    Closes: #958515, #958090
  * Upstream says diamond-aligner does not run on 32bit systems
    https://github.com/bbuchfink/diamond/issues/347#issuecomment-622051316

 -- Andreas Tille <tille@debian.org>  Thu, 30 Apr 2020 21:43:33 +0200

diamond-aligner (0.9.32-1) unstable; urgency=medium

  * New upstream version

 -- Andreas Tille <tille@debian.org>  Wed, 29 Apr 2020 12:43:07 +0200

diamond-aligner (0.9.31-2) unstable; urgency=medium

  * Use test from proteinorto as build time and autopkgtest

 -- Andreas Tille <tille@debian.org>  Tue, 28 Apr 2020 19:10:26 +0200

diamond-aligner (0.9.31-1) unstable; urgency=medium

  * New upstream version
  * Standards-Version: 4.5.0 (routine-update)
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * Set upstream metadata fields: Repository, Repository-Browse.

 -- Andreas Tille <tille@debian.org>  Fri, 27 Mar 2020 16:13:46 +0100

diamond-aligner (0.9.30-3) unstable; urgency=medium

  * Team upload.
  * Patch from upstream to fix i386 & s390x builds

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Mon, 17 Feb 2020 14:22:48 +0100

diamond-aligner (0.9.30-2) unstable; urgency=medium

  * Team upload.
  * No ld.gold for alpha

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Thu, 06 Feb 2020 15:41:48 +0100

diamond-aligner (0.9.30-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Wed, 05 Feb 2020 14:04:34 +0100

diamond-aligner (0.9.29+dfsg-5) unstable; urgency=medium

  * Team upload.
  * Restrict the use of the gold linker on architectures where it is not
    available.

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Tue, 14 Jan 2020 08:54:46 +0100

diamond-aligner (0.9.29+dfsg-4) unstable; urgency=medium

  * Breaks+Replaces: diamond
    Closes: #948849

 -- Andreas Tille <tille@debian.org>  Tue, 14 Jan 2020 08:03:08 +0100

diamond-aligner (0.9.29+dfsg-3) unstable; urgency=medium

  * Team upload.
  * patch to enable non-x86 builds again (no -msse, etc..)
    Closes: #942850

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Mon, 13 Jan 2020 19:34:04 +0100

diamond-aligner (0.9.29+dfsg-2) unstable; urgency=medium

  [ Frédéric Bonnard ]
  * Upstream 0.9.29 includes patch to build diamond-aligner on any
    Closes: #942850

  [ Andreas Tille ]
  * Package diamond was removed from Debian so the name /usr/bin/diamond
    can be used again
  * Set upstream metadata fields: Bug-Database, Bug-Submit.

 -- Andreas Tille <tille@debian.org>  Fri, 10 Jan 2020 13:50:28 +0100

diamond-aligner (0.9.29+dfsg-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Steffen Moeller <moeller@debian.org>  Thu, 05 Dec 2019 00:17:29 +0100

diamond-aligner (0.9.28+dfsg-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * One patch against upstream could go (-mnative no longer set)

 -- Steffen Moeller <moeller@debian.org>  Fri, 08 Nov 2019 19:28:00 +0100

diamond-aligner (0.9.26+dfsg-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Steffen Moeller <moeller@debian.org>  Fri, 20 Sep 2019 00:20:39 +0200

diamond-aligner (0.9.25+dfsg-1) unstable; urgency=medium

  * New upstream version
  * debhelper-compat 12
  * Standards-Version: 4.4.0
  * Drop unneeded paragraph from d/copyright

 -- Andreas Tille <tille@debian.org>  Thu, 01 Aug 2019 15:00:33 +0200

diamond-aligner (0.9.24+dfsg-1) unstable; urgency=medium

  * New upstream version

 -- Andreas Tille <tille@debian.org>  Sat, 29 Dec 2018 21:10:22 +0100

diamond-aligner (0.9.23+dfsg-2) unstable; urgency=medium

  * Restrict architecture to amd64
    Closes: #916370

 -- Andreas Tille <tille@debian.org>  Thu, 13 Dec 2018 19:52:54 +0100

diamond-aligner (0.9.23+dfsg-1) unstable; urgency=medium

  * New upstream version
  * Standards-Version: 4.2.1

 -- Andreas Tille <tille@debian.org>  Thu, 13 Dec 2018 13:48:51 +0100

diamond-aligner (0.9.22+dfsg-2) unstable; urgency=medium

  * Do not use march=native flag
    Closes: #906615
  * Standards-Version: 4.2.0

 -- Andreas Tille <tille@debian.org>  Sun, 19 Aug 2018 06:41:39 +0200

diamond-aligner (0.9.22+dfsg-1) unstable; urgency=medium

  * New upstream version

 -- Andreas Tille <tille@debian.org>  Tue, 22 May 2018 15:54:27 +0200

diamond-aligner (0.9.21+dfsg-1) unstable; urgency=medium

  * New upstream version
  * Point Vcs fields to salsa.debian.org
  * Standards-Version: 4.1.4

 -- Andreas Tille <tille@debian.org>  Thu, 26 Apr 2018 15:10:07 +0200

diamond-aligner (0.9.19+dfsg-1) unstable; urgency=medium

  * New upstream version

 -- Andreas Tille <tille@debian.org>  Thu, 29 Mar 2018 09:37:31 +0200

diamond-aligner (0.9.17+dfsg-1) unstable; urgency=medium

  * New upstream version
  * Standards-Version: 4.1.3
  * debhelper 11

 -- Andreas Tille <tille@debian.org>  Sat, 10 Feb 2018 18:10:44 +0100

diamond-aligner (0.9.10+dfsg-1) unstable; urgency=medium

  * New upstream version
  * Force the symbol with c++ explicit function template instantiation for the
    latter prototype instead of relying on implicit instantiation
  * Standards-Version: 4.1.0 (no changes needed)
  * Do not parse d/changelog

 -- Andreas Tille <tille@debian.org>  Mon, 18 Sep 2017 14:51:21 +0200

diamond-aligner (0.9.8+dfsg-1) unstable; urgency=medium

  * New upstream version

 -- Andreas Tille <tille@debian.org>  Mon, 19 Jun 2017 08:15:18 +0200

diamond-aligner (0.8.35+dfsg-1) unstable; urgency=medium

  * New upstream version
    Closes: #852752
  * Drop -march=native flag
    Closes: #852753

 -- Andreas Tille <tille@debian.org>  Fri, 03 Feb 2017 21:42:37 +0100

diamond-aligner (0.8.34+dfsg-1) unstable; urgency=medium

  * Initial release (Closes: #850242)

 -- Andreas Tille <tille@debian.org>  Thu, 05 Jan 2017 11:51:45 +0100
