r-bioc-affxparser (1.72.0-1) unstable; urgency=medium . * Team upload. * Add suggested patch for bug #1024580 but further discussion is needed * Standards-Version: 4.6.2 (routine-update) * Update d/copyright r-bioc-affy (1.78.2-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse. r-bioc-affyio (1.70.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-all (1.42.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Add debian/tests/autopkgtest-pkg-r.conf r-bioc-altcdfenvs (1:2.62.0-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-altcdfenvs (1:2.60.0-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-altcdfenvs (1:2.58.0-1) unstable; urgency=medium . * Team upload. * New upstream version 2.58.0 * Bump Standards-Version to 4.6.1 (no changes needed) r-bioc-altcdfenvs (1:2.56.0-1) unstable; urgency=medium . * New upstream version r-bioc-altcdfenvs (1:2.54.0-2) unstable; urgency=medium . * Team Upload. * d/t/autopkgtest-pkg-r.conf: Fix the name of test-depends, r-cran-r-unit => r-bioc-runit (Closes: #995206) r-bioc-altcdfenvs (1:2.54.0-1) unstable; urgency=medium . * Provide autopkgtest-pkg-r.conf to make sure RUnit will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on dh-r. r-bioc-altcdfenvs (1:2.52.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-altcdfenvs (1:2.50.0-1) unstable; urgency=medium . [ Dylan Aïssi ] * New upstream version * Standards-Version: 4.5.0 (routine-update) * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) . [ Andreas Tille ] * Replace tabs from copyright r-bioc-altcdfenvs (1:2.48.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 r-bioc-altcdfenvs (1:2.46.0-1) unstable; urgency=medium . [ Dylan Aïssi ] * Team upload. * Add Testsuite: autopkgtest-pkg-r . [ Andreas Tille ] * New upstream version * debhelper 12 * Standards-Version: 4.3.0 * rename debian/tests/control.autodep8 to debian/tests/control r-bioc-altcdfenvs (1:2.44.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 * Remove trailing whitespace in debian/copyright r-bioc-altcdfenvs (1:2.42.0-3) unstable; urgency=medium . * Rebuild for R 3.5 transition r-bioc-altcdfenvs (1:2.42.0-2) unstable; urgency=medium . * Point Vcs-fields to Salsa r-bioc-altcdfenvs (1:2.42.0-1) unstable; urgency=medium . * New upstream version * debhelper 11 * Maintainer: Debian R Packages Maintainers * dh-update-R to update Build-Depends * Standards-Version: 4.1.4 r-bioc-altcdfenvs (1:2.40.0-1) unstable; urgency=medium . * New upstream version * Secure URI in watch file r-bioc-altcdfenvs (1:2.38.0-2) unstable; urgency=medium . * Standards-Version: 4.1.1 * Remove unneeded testsuite header r-bioc-altcdfenvs (1:2.38.0-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Debhelper 10 * Standards-Version: 4.1.0 * Add README.source to document binary data r-bioc-altcdfenvs (1:2.36.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-altcdfenvs (1:2.34.0-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-altcdfenvs (1:2.32.0-1) unstable; urgency=medium . * New upstream version r-bioc-altcdfenvs (1:2.30.0-1) unstable; urgency=medium . * New upstream version r-bioc-altcdfenvs (1:2.26.0-2) unstable; urgency=medium . * Previous upload was to unstable by accident. Revert to BioConductor version dependencies which are in Jessie Closes: #774280 r-bioc-altcdfenvs (2.28.0-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-altcdfenvs (2.26.0-1) unstable; urgency=medium . * New upstream version * Moved debian/upstream to debian/upstream/metadata * Add autopkgtest r-bioc-altcdfenvs (2.24.0-1) unstable; urgency=low . * Initial release (closes: #731162) r-bioc-annotationfilter (1.24.0+dfsg-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-annotationfilter (1.22.0+dfsg-1) unstable; urgency=medium . * New upstream version * Reorder sequence of d/control fields by cme (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-annotationfilter (1.20.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version 1.20.0+dfsg * Bump Standards-Version to 4.6.1 (no changes needed) r-bioc-annotationfilter (1.18.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-annotationfilter (1.16.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-annotationfilter (1.14.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-annotationfilter (1.12.0+dfsg-1) unstable; urgency=medium . [ Dylan Aïssi ] * New upstream version * Standards-Version: 4.5.0 (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) . [ Andreas Tille ] * Set upstream metadata fields: Bug-Submit, Repository. r-bioc-annotationfilter (1.10.0+dfsg-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 * Trim trailing whitespace. * Set upstream metadata fields: Bug-Database, Repository. * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/ r-bioc-annotationfilter (1.8.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.3.0 r-bioc-annotationfilter (1.6.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-annotationfilter (1.4.0+dfsg-1) unstable; urgency=medium . * Rebuild for R 3.5 transition * Remove autogenerated HTML docs since it is including compressed JS r-bioc-annotationfilter (1.4.0-3) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-annotationfilter (1.4.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-annotationfilter (1.4.0-1) unstable; urgency=medium . * New upstream version * debhelper 11 * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 r-bioc-annotationfilter (1.2.0-1) unstable; urgency=medium . * New upstream version r-bioc-annotationfilter (1.0.0-1) unstable; urgency=medium . * Initial release (closes: #878412) r-bioc-aroma.light (3.30.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-arrayexpress (1.60.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-arrayexpress (1.57.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-arrayexpress (1.56.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-arrayexpress (1.54.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-arrayexpress (1.52.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * debhelper-compat 13 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Trim trailing whitespace. r-bioc-arrayexpress (1.50.0-2) unstable; urgency=medium . * Team upload. * Source-only-upload for testing migration. r-bioc-arrayexpress (1.50.0-1) unstable; urgency=medium . * Initial release (closes: #975340) r-bioc-basilisk (1.12.1+ds-2) unstable; urgency=medium . * Team upload. * Exclude test "setupBasiliskEnv works with local packages" since it keeps on failing in Salsa CI r-bioc-basilisk (1.12.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Architecture: all * Previously excluded test should work r-bioc-basilisk.utils (1.12.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-beachmat (2.16.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-beachmat (2.14.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-beachmat (2.12.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-beachmat (2.10.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-beachmat (2.8.1+ds-2) unstable; urgency=medium . * Disable reprotest * Test-Depends: r-bioc-hdf5array r-bioc-beachmat (2.8.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Provide autopkgtest-pkg-r.conf to make sure Test-Depends will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-beachmat (2.6.4+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Test-Depends: texlive-latex-base r-bioc-beachmat (2.6.2+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.1 (routine-update) r-bioc-beachmat (2.6.1+ds-2) unstable; urgency=medium . * Team upload. * Add g++ to autopkgtests deps r-bioc-beachmat (2.6.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-beachmat (2.6.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Test-Depends: r-bioc-biocparallel, r-cran-devtools r-bioc-beachmat (2.4.0+ds-2) unstable; urgency=medium . * Team upload. * debhelper-compat 13 (routine-update) * Trim trailing whitespace. r-bioc-beachmat (2.4.0+ds-1) unstable; urgency=medium . * Initial release (closes: #962991) r-bioc-biobase (2.60.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-biocbaseutils (1.2.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-bioccheck (1.36.1+dfsg-1) unstable; urgency=medium . * Team upload. * Rebuild against latest version of r-base Closes: #1039633 * New upstream version * Reduce piuparts noise in transitions * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-bioccheck (1.34.2+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-bioccheck (1.32.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version 1.32.1+dfsg r-bioc-bioccheck (1.32.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-bioccheck (1.30.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-bioccheck (1.28.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * No manual installation of files * Provide autopkgtest-pkg-r.conf to make sure Test-Depends will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r * Disable reprotest r-bioc-bioccheck (1.26.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * Deactivate one more test r-bioc-bioccheck (1.24.0+dfsg-2) unstable; urgency=medium . * Add r-cran-devtools to test-deps * Add patch to ski tests requiring r-cran-RJSONIO (not available in Debian and non-free) * Disable Testsuite: autopkgtest-pkg-r r-bioc-bioccheck (1.24.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-bioccheck (1.22.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #958309) r-bioc-biocfilecache (2.8.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-biocgenerics (0.46.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Automatic update of Test-Depends r-bioc-biocio (1.10.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-biocio (1.8.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-biocio (1.6.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-biocio (1.4.0+dfsg-1) unstable; urgency=medium . * Team Upload. * New upstream version 1.4.0+dfsg r-bioc-biocio (1.2.0+dfsg-2) unstable; urgency=medium . * Packaging update * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Trim trailing whitespace. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-biocio (1.2.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #993814) r-bioc-biocparallel (1.34.2-1) unstable; urgency=medium . * New upstream version * Update Test-Depends using dh-update-R r-bioc-biocsingular (1.16.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-biocsingular (1.14.0+ds-2) unstable; urgency=medium . * Team upload. * Disable reprotest * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-biocsingular (1.14.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-biocsingular (1.12.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-biocsingular (1.10.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-biocsingular (1.8.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-biocsingular (1.6.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-biocsingular (1.4.0+ds-2) unstable; urgency=medium . * Team upload. * debhelper-compat 13 (routine-update) * Trim trailing whitespace. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-biocsingular (1.4.0+ds-1) unstable; urgency=medium . * Initial release (closes: #966452) r-bioc-biocstyle (2.28.0+dfsg-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Manually set Test-Depends r-bioc-biocversion (3.17.1-1) unstable; urgency=medium . * Team Upload. . [ Andreas Tille ] * Disable reprotest . [ Charles Plessy ] * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-biocviews (1.68.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Migrate from d/t/control to d/t/autopkgtest-pkg-r.conf * Reorder sequence of d/control fields by cme (routine-update) r-bioc-biomformat (1.28.0+dfsg-1) unstable; urgency=medium . * Disable reprotest * Reduce piuparts noise in transitions * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-biostrings (2.68.1-1) unstable; urgency=medium . * Reduce piuparts noise in transitions * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-biostrings (2.66.0-1) unstable; urgency=medium . * Disable reprotest * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-biostrings (2.64.1-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-biostrings (2.64.0-1) unstable; urgency=medium . * New upstream version Closes: #1009467 * Reorder sequence of d/control fields by cme (routine-update) * Standards-Version: 4.6.1 (routine-update) r-bioc-biostrings (2.62.0-1) unstable; urgency=medium . * New upstream version r-bioc-biostrings (2.60.2-1) unstable; urgency=medium . [ Steffen Moeller ] * Team upload. * New upstream version * d/u/metadata: Added ref to guix * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. . [ Andreas Tille ] * Provide autopkgtest-pkg-r.conf to make sure runit will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-biostrings (2.58.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-biostrings (2.56.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-biostrings (2.54.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 r-bioc-biostrings (2.52.0-1) unstable; urgency=medium . * New upstream version * debhelper 12 * dh-update-R to update Build-Depends r-bioc-biostrings (2.50.2-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.3.0 r-bioc-biostrings (2.50.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-biostrings (2.48.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-biostrings (2.48.0-1) unstable; urgency=medium . * New upstream version * debhelper 11 * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 * Secure URI in watch file r-bioc-biostrings (2.46.0-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Standards-Version: 4.1.1 * Add README.source to document binary data files r-bioc-biostrings (2.44.2-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.1.0 (no changes needed) r-bioc-biostrings (2.44.0-1) unstable; urgency=medium . * Team upload * New upstream version * Bump Build-Depends: r-bioc-xvector (>= 0.16.0) r-bioc-biostrings (2.42.1-1) unstable; urgency=medium . * New upstream version * debhelper 10 * d/watch: version=4 * Removed unused lintian override r-bioc-biostrings (2.42.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-biostrings (2.40.2-1) unstable; urgency=medium . * New upstream version * Versioned Build-Depends: r-bioc-s4vectors (>= 0.10.1) r-bioc-biostrings (2.40.0-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control * Bumped versioned (Build-)Depends r-bioc-biostrings (2.38.4-1) unstable; urgency=medium . * New upstream version Build-Depends: r-bioc-iranges (>= 2.4.7) * cme fix dpkg-control * Bumped Versioned Build-Depends of r-bioc-xvector Closes: #815429 r-bioc-biostrings (2.38.0-1) unstable; urgency=medium . * New upstream version r-bioc-biostrings (2.36.1-1) unstable; urgency=medium . * New upstream version r-bioc-biostrings (2.34.0-1) experimental; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-biostrings (2.32.1-1) unstable; urgency=medium . * New upstream version r-bioc-biostrings (2.32.0-1) unstable; urgency=medium . * New upstream version * Patch to use Debian packaged zlib * Versioned (Build-)Depends from r-bioc-xvector * Add autopkgtest r-bioc-biostrings (2.30.1-1) unstable; urgency=low . * New upstream version Closes: #730592 * debian/{control,copyright}: Fixed homepage * Build-Depends: r-bioc-xvector r-bioc-biostrings (2.28.0-1) unstable; urgency=low . * Initial release (closes: #721800). r-bioc-bladderbatch (1.38.0-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-chemminer (3.52.0+dfsg-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Add debian/tests/autopkgtest-pkg-r.conf (Lets see whether the test works which was formerly switched off) r-bioc-complexheatmap (2.16.0+dfsg-1) unstable; urgency=medium . * Build against latest version of r-base Closes: #1039636 * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-complexheatmap (2.14.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-complexheatmap (2.12.1+dfsg-1) unstable; urgency=medium . * New upstream version * Exclude usage of dendsort in testsuite r-bioc-complexheatmap (2.12.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-complexheatmap (2.10.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version 2.10.0+dfsg * Run dh-update-R, cme r-bioc-complexheatmap (2.8.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-complexheatmap (2.6.2+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-complexheatmap (2.6.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-complexheatmap (2.4.3+dfsg-2) unstable; urgency=medium . * Testsuite: autopkgtest-pkg-r (routine-update) r-bioc-complexheatmap (2.4.3+dfsg-1) unstable; urgency=medium . * Initial release (closes: #931055) r-bioc-consensusclusterplus (1.64.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-ctc (1.74.0-1) unstable; urgency=medium . * Team upload * New upstream version * Disable reprotest * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-decoupler (2.6.0+dfsg-2) unstable; urgency=medium . * Manually change versioned Test-Depends which was specified wrongly in DESCRIPTION Closes: #1043224 r-bioc-decoupler (2.6.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-delayedarray (0.26.7+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedarray (0.26.6+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-delayedarray (0.24.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-delayedarray (0.22.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-delayedarray (0.20.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version 0.20.0+dfsg r-bioc-delayedarray (0.18.0+dfsg-2) unstable; urgency=medium . * Team upload. * Disable reprotest * Test-Depends: r-bioc-genefilter, r-bioc-biocparallel r-bioc-delayedarray (0.18.0+dfsg-1) unstable; urgency=medium . [ Steffen Moeller ] * Team upload. * Added registry entries to d/u/metadata * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (routine-update) . [ Andreas Tille ] * Provide autopkgtest-pkg-r.conf to make sure runit will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-delayedarray (0.16.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedarray (0.16.0+dfsg-2) unstable; urgency=medium . * Team upload. * Run the tests via autopkgtest-pkg-r, not BiocGenerics:::testPackage. Same testsuite, but run in a manner that works. Closes: #979555 * Standards-Version: 4.5.1 (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-delayedarray (0.16.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedarray (0.14.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-bioc-delayedarray (0.14.0+dfsg-2) unstable; urgency=medium . * Add r-bioc-biocparallel to test-deps (Closes: #961350) r-bioc-delayedarray (0.14.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedarray (0.12.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-delayedarray (0.12.2+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedarray (0.12.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedarray (0.12.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 r-bioc-delayedarray (0.10.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper 12 * Standards-Version: 4.3.0 r-bioc-delayedarray (0.8.0+dfsg-2) unstable; urgency=medium . * Team upload. * dh-update-R to update Build-Depends Remove useless Build-Depends: libgdal-dev * Add r-bioc-biocparallel (>= 1.16.5) to build-dep to avoid FTBFS on some uncommon architectures. r-bioc-delayedarray (0.8.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends * Switch Architecture from all to any r-bioc-delayedarray (0.6.6+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-delayedarray (0.6.5+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedarray (0.6.4+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.0 r-bioc-delayedarray (0.6.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedarray (0.6.2+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.1.5 r-bioc-delayedarray (0.6.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedarray (0.6.0+dfsg-1) unstable; urgency=medium . * Team upload. * Rebuild for R 3.5 transition * dh-update-R to update Build-Depends * Exclude autogenerated HTML containing compressed JS r-bioc-delayedarray (0.6.0-2) unstable; urgency=medium . * Team upload. * Fix Maintainer and Vcs-fields r-bioc-delayedarray (0.6.0-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper 11 * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 r-bioc-delayedarray (0.4.1-1) unstable; urgency=medium . * Team upload * New upstream version r-bioc-delayedarray (0.2.7-2) unstable; urgency=medium . * Team upload. * Moved packaging from SVN to Git * Standards-Version: 4.1.1 * cme fix dpkg-control r-bioc-delayedarray (0.2.7-1) unstable; urgency=medium . * New upstream version * Update Build-Depends: r-bioc-s4vectors (>= 0.14.3) * Add missing dependency for autopkgtest: r-cran-runit * Add copyright year to debian/copyright r-bioc-delayedarray (0.2.4-1) unstable; urgency=medium . * Initial release (Closes: #863415) r-bioc-delayedmatrixstats (1.22.5+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedmatrixstats (1.22.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-delayedmatrixstats (1.20.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedmatrixstats (1.18.2+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedmatrixstats (1.18.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends (routine-update) * Fix separator in version number of Matrix r-bioc-delayedmatrixstats (1.18.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-delayedmatrixstats (1.16.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version. * Test-Depends: r-bioc-hdf5array * Disable reprotest * dh-update-R to update Build-Depends (routine-update) r-bioc-delayedmatrixstats (1.14.3+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-s4vectors. * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-delayedmatrixstats (1.12.3+ds-1) unstable; urgency=medium . [ Andreas Tille ] * Team upload. * New upstream version r-bioc-delayedmatrixstats (1.12.2+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-delayedmatrixstats (1.12.1+ds-3) unstable; urgency=medium . * Team upload. * patch Description so that the generated binary package also requires r-cran-matrix >= 1.3-2 r-bioc-delayedmatrixstats (1.12.1+ds-2) unstable; urgency=medium . * Team upload. * debian/control: depend on newer r-cran-matrix to fix failing tests. r-bioc-delayedmatrixstats (1.12.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.1 (routine-update) * debian/tests/control: skip-not-installable r-bioc-delayedmatrixstats (1.12.0+ds-1) unstable; urgency=medium . [ Andreas Tille ] * Team upload. * New upstream version . [ Michael R. Crusoe ] * Trim trailing whitespace. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-delayedmatrixstats (1.10.1+ds-2) unstable; urgency=medium . * Team upload. * debhelper-compat 13 (routine-update) r-bioc-delayedmatrixstats (1.10.1+ds-1) unstable; urgency=medium . * Initial release (closes: #966547) r-bioc-destiny (3.14.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-destiny (3.12.0-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) * lintian-overrides (See lintian bug #1017966) r-bioc-destiny (3.10.0-1) unstable; urgency=medium . * Team upload. * New upstream version 3.10.0 * Bump Standards-Version to 4.6.1 (no changes needed) r-bioc-destiny (3.8.1-1) unstable; urgency=medium . * New upstream version r-bioc-destiny (3.8.0-2) unstable; urgency=medium . * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r * Disable reprotest r-bioc-destiny (3.8.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * Trim trailing whitespace. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-destiny (3.4.0-1) unstable; urgency=medium . * New upstream version r-bioc-destiny (3.2.0-2) unstable; urgency=medium . * debhelper-compat 13 (routine-update) r-bioc-destiny (3.2.0-1) unstable; urgency=medium . * Initial release (closes: #969997) r-bioc-dir.expiry (1.8.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-dirichletmultinomial (1.42.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Add debian/tests/autopkgtest-pkg-r.conf r-bioc-dirichletmultinomial (1.40.0-1) unstable; urgency=medium . * New upstream version r-bioc-dirichletmultinomial (1.38.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-dirichletmultinomial (1.36.0-1) unstable; urgency=medium . * Team upload. * New upstream version 1.36.0 r-bioc-dirichletmultinomial (1.34.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-dirichletmultinomial (1.32.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-dirichletmultinomial (1.30.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-dirichletmultinomial (1.28.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 r-bioc-dirichletmultinomial (1.26.0-1) unstable; urgency=medium . * New upstream version * debhelper 12 r-bioc-dirichletmultinomial (1.24.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.3.0 r-bioc-dirichletmultinomial (1.24.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 * Remove trailing whitespace in debian/copyright r-bioc-dirichletmultinomial (1.22.0-2) unstable; urgency=medium . * dh-update-R to update Build-Depends r-bioc-dirichletmultinomial (1.22.0-1) unstable; urgency=medium . * Initial release (closes: #899056) r-bioc-dnacopy (1.74.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Drop debian/tests/* in favour of Testsuite: autopkgtest-pkg-r r-bioc-drimseq (1.28.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Migrate from d/t/control to d/t/autopkgtest-pkg-r.conf r-bioc-drimseq (1.26.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-drimseq (1.24.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-drimseq (1.22.0-2) unstable; urgency=medium . * Team Upload. + Source-only upload for testing migration r-bioc-drimseq (1.22.0-1) unstable; urgency=medium . [routine-update] * New upstream version * Trim trailing whitespace. r-bioc-dupradar (1.30.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Add debian/tests/autopkgtest-pkg-r.conf r-bioc-ebseq (1.40.0-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) * Drop debian/tests/* in favour of Testsuite: autopkgtest-pkg-r r-bioc-edger (3.42.4+dfsg-1) unstable; urgency=medium . * New upstream version * Reorder sequence of d/control fields by cme (routine-update) r-bioc-eir (1.40.0+ds-2) unstable; urgency=medium . * Team upload * Take over architecture restriction from debien/tests/control to debian/tests/utopkgtest-pkg-r.conf r-bioc-eir (1.40.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-fishpond (2.6.2+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-fishpond (2.4.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Remove unused license definitions for LGPL-3.0+. * Architecture: all r-bioc-fishpond (2.4.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) * lintian-overrides (See lintian bug #1017966) * Drop old autopkgtest files * Drop src/readEDS.cpp from d/copyright r-bioc-fishpond (2.2.0+ds-2) unstable; urgency=medium . * Team upload. * Add test-dep on r-cran-data.table * Add test dep on tximportdata * Do not run tests requiring non-existing data r-bioc-fishpond (2.2.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) * Upstream has removed test so we do not need to patch it r-bioc-fishpond (2.0.1+ds-2) unstable; urgency=medium . * Team Upload. * Add extra_depends on r-cran-testthat to put up with salsa CI woes, although it would work perfect on debci * r-cran-samr, r-bioc-deseq2 to autopkgtest-r.conf (again for salsa CI) r-bioc-fishpond (2.0.1+ds-1) unstable; urgency=medium . [ Nilesh Patra, Steffen Moeller ] * Initial release (closes: #1001397) r-bioc-fmcsr (1.42.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Do not use vignette for testing and add d/t/autopkgtest-pkg-r.conf r-bioc-genomeinfodb (1.36.1+dfsg-1) unstable; urgency=medium . * Remove autogenerated HTML docs since it is including compressed JS * New upstream version * Fixed debian/watch for BioConductor r-bioc-genomeinfodb (1.34.9-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.34.7-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.34.6-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-genomeinfodb (1.34.4-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-genomeinfodb (1.34.3-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.32.4-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.32.3-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.32.2-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.32.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-genomeinfodb (1.30.1-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-genomeinfodb (1.30.0-1) unstable; urgency=medium . * Team upload. * New upstream version 1.30.0 r-bioc-genomeinfodb (1.28.4-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (3) (routine-update) r-bioc-genomeinfodb (1.28.2-1) unstable; urgency=medium . [ Steffen Moeller ] * Team Upload. * New upstream version 1.28.2 * d/u/metadata: completed/updated registry entries * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (routine-update) . [ Andreas Tille ] * Provide autopkgtest-pkg-r.conf to make sure runit will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-genomeinfodb (1.26.2-2) unstable; urgency=medium . * Drop test trying to download from ftp://ftp.ncbi.nlm.nih.gov/ r-bioc-genomeinfodb (1.26.2-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.26.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.5.1 (routine-update) * Autopkgtest restriction: needs-internet r-bioc-genomeinfodb (1.26.0-1) unstable; urgency=medium . * New upstream version * debian/copyright: use spaces rather than tabs to start continuation lines. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-genomeinfodb (1.24.2-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-bioc-genomeinfodb (1.24.0-1) unstable; urgency=medium . * New upstream version * Update Build-Depends r-bioc-genomeinfodb (1.22.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-genomeinfodb (1.22.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 r-bioc-genomeinfodb (1.20.0-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.3.0 * rename debian/tests/control.autodep8 to debian/tests/control r-bioc-genomeinfodb (1.18.1-1) unstable; urgency=medium . * Team upload. * New upstream version. * Add Testsuite: autopkgtest-pkg-r. r-bioc-genomeinfodb (1.18.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 * Remove trailing whitespace in debian/copyright r-bioc-genomeinfodb (1.16.0-4) unstable; urgency=medium . * Standards-Version: 4.1.5 r-bioc-genomeinfodb (1.16.0-3) unstable; urgency=medium . * Rebuild for R 3.5 transition * dh-update-R to update Build-Depends r-bioc-genomeinfodb (1.16.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-genomeinfodb (1.16.0-1) unstable; urgency=medium . * New upstream version * debhelper 11 * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 r-bioc-genomeinfodb (1.14.0-1) unstable; urgency=medium . * New upstream version * Add registry entry r-bioc-genomeinfodb (1.12.3-1) unstable; urgency=medium . * New upstream version * Secure URI in watch file r-bioc-genomeinfodb (1.12.2-2) unstable; urgency=medium . * Moved packaging from SVN to Git * Standards-Version: 4.1.1 * Add README.source to document binary data file r-bioc-genomeinfodb (1.12.2-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.1.0 (no changes needed) r-bioc-genomeinfodb (1.12.0-1) unstable; urgency=medium . * Team upload * New upstream version * Add Build-Depends: r-bioc-genomeinfodbdata r-bioc-genomeinfodb (1.10.3-1) unstable; urgency=medium . * Team upload. * New upstream version - Update URL-s to work with reorganized NCBI data (Closes #859864) * Build-depend on r-cran-rcurl r-bioc-genomeinfodb (1.10.2-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.10.1-1) unstable; urgency=medium . * New upstream version * debhelper 10 * d/watch: version=4 r-bioc-genomeinfodb (1.10.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-genomeinfodb (1.8.0-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.6.3-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-genomeinfodb (1.6.0-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.4.3-1) unstable; urgency=medium . * New upstream version * Fix watch file r-bioc-genomeinfodb (1.4.1-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.4.0-1) unstable; urgency=medium . * New upstream version r-bioc-genomeinfodb (1.2.0-1) experimental; urgency=medium . * New upstream version * cme fix dpkg-control * add new (Build-)Depends: r-bioc-biocgenerics * test depends from r-bioc-genomicranges r-bioc-genomeinfodb (1.0.2-2) unstable; urgency=medium . * Fix autopkgtest dependencies (Thanks for the patch to Lucas Kanashiro ) Closes: #759415 r-bioc-genomeinfodb (1.0.2-1) unstable; urgency=medium . * Initial release (closes: #750936) r-bioc-genomicranges (1.52.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-genomicranges (1.50.2+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-genomicranges (1.50.1+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-genomicranges (1.48.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-genomicranges (1.46.1+dfsg-1) unstable; urgency=medium . * Disable reprotest * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-genomicranges (1.44.0+dfsg-1) unstable; urgency=medium . [ Steffen Moeller ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (routine-update) * d/u/metadata: - Set upstream fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. (routine-update) - Completed references to registries . [ Andreas Tille ] * Provide autopkgtest-pkg-r.conf to make sure Test-Depends will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-genomicranges (1.42.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-genomicranges (1.40.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-genomicranges (1.38.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.4.1 r-bioc-genomicranges (1.36.1+dfsg-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.0 r-bioc-genomicranges (1.36.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.3.0 r-bioc-genomicranges (1.34.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends * Remove autogenerated HTML docs since it is including compressed JS r-bioc-genomicranges (1.32.7-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.2.1 r-bioc-genomicranges (1.32.6-1) unstable; urgency=medium . * New upstream version r-bioc-genomicranges (1.32.4-1) unstable; urgency=medium . * New upstream version r-bioc-genomicranges (1.32.3-2) unstable; urgency=medium . * Standards-Version: 4.1.5 r-bioc-genomicranges (1.32.3-1) unstable; urgency=medium . * New upstream version r-bioc-genomicranges (1.32.2-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends r-bioc-genomicranges (1.32.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-genomicranges (1.32.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 r-bioc-genomicranges (1.30.3-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.1.3 * debhelper 11 r-bioc-genomicranges (1.30.0-1) unstable; urgency=medium . * New upstream version * Bump versioned Build-Depends: r-bioc-iranges (>= >= 2.11.16) * Secure URI in watch file r-bioc-genomicranges (1.28.6-1) unstable; urgency=medium . * Team upload * New upstream version r-bioc-genomicranges (1.28.5-1) unstable; urgency=medium . * New upstream version * Move packaging from SVN to Git * Standards-Version: 4.1.1 r-bioc-genomicranges (1.28.4-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.1.0 (no changes needed) r-bioc-genomicranges (1.28.2-1) unstable; urgency=medium . * Team upload * New upstream version * Update Build-Depends: r-bioc-genomeinfodb (>= 1.11.5), r-bioc-iranges (>= 2.9.11) r-bioc-genomicranges (1.26.2-1) unstable; urgency=medium . * New upstream version * debhelper 10 * d/watch: version=4 r-bioc-genomicranges (1.26.1-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-genomicranges (1.24.0-1) unstable; urgency=medium . * New upstream version * Adnjust versioned Build-Depends r-bioc-xvector r-bioc-genomicranges (1.22.4-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control * do not skip tests needing r-bioc-summarizedexperiment any more since package is available now * Versioned (Build-)Depends: r-bioc-biocgenerics (>= 0.16.1) r-bioc-genomicranges (1.22.0-1) unstable; urgency=medium . * New upstream version * Skip test requiring extra module SummarizedExperiment r-bioc-genomicranges (1.20.8-1) unstable; urgency=medium . * New upstream version * Fixed watch file r-bioc-genomicranges (1.20.5-1) unstable; urgency=medium . * New upstream version r-bioc-genomicranges (1.20.3-1) unstable; urgency=medium . * New upstream version r-bioc-genomicranges (1.18.1-1) experimental; urgency=medium . * New upstream version * cme fix dpkg-control * Drop test requiring TxDb.Dmelanogaster.UCSC.dm3.ensGene from test suite r-bioc-genomicranges (1.16.4-2) unstable; urgency=medium . * Add missing r-cran-digest to Recommends + tests/control Closes: #757712 r-bioc-genomicranges (1.16.4-1) unstable; urgency=medium . * New upstream version r-bioc-genomicranges (1.16.3-1) unstable; urgency=medium . * New upstream version * New (Build-)Depends: r-bioc-genomeinfodb * cme fix dpkg-control * add autopkgtest r-bioc-genomicranges (1.14.3-1) unstable; urgency=low . * New upstream version Closes: #730574 * Build-Depends: r-bioc-xvector r-bioc-genomicranges (1.12.4-1) unstable; urgency=low . * Initial release (closes: #721801) * Added README.source to document binary files in source tarball r-bioc-geoquery (2.68.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Set upstream metadata fields: Bug-Submit. r-bioc-graph (1.78.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-hdf5array (1.28.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-hdf5array (1.26.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-hdf5array (1.24.2-1) unstable; urgency=medium . * Team upload * New upload version * Disable reprotest r-bioc-hdf5array (1.24.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-hdf5array (1.24.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-hdf5array (1.22.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-hdf5array (1.20.0-2) unstable; urgency=medium . * Team Upload. * d/rules: Remove test_H5ADMatrixSeed-class.R until zellkonverter gets accepted, revert once done r-bioc-hdf5array (1.20.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * Refresh patches * Add B-D on r-bioc-rhdf5filters r-bioc-hdf5array (1.18.1-3) unstable; urgency=high . * Team upload. * debian/docs: unneeded, removed r-bioc-hdf5array (1.18.1-2) unstable; urgency=medium . * Team upload. * Fix pkg-r-autopkgtest, add missing dependency on r-cran-runit. * Remove debian/tests/run-unit-tests, as that duplicates that now-working pkg-r-autopkgtest r-bioc-hdf5array (1.18.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.1 (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-hdf5array (1.18.0-2) unstable; urgency=medium . * Team upload. * debian/control:Turn off pkg-r-autopkgtest, the hand written autopkgtests do the same thing but work r-bioc-hdf5array (1.18.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-hdf5array (1.16.1-2) unstable; urgency=medium . * Team upload. r-bioc-hdf5array (1.16.1-1) unstable; urgency=medium . * Initial release (closes: #966553) r-bioc-hilbertvis (1.58.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Switch from debian/tests/control to debian/tests/autopkgtest-pkg-r.conf * Reduce piuparts noise in transitions (routine-update) r-bioc-hsmmsinglecell (1.20.0-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-hypergraph (1.72.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-ihw (1.28.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-impute (1.74.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-interactivedisplaybase (1.38.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Create debian/tests/autopkgtest-pkg-r.conf r-bioc-iranges (2.34.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-iranges (2.32.0-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (2.30.1-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (2.30.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-iranges (2.28.0-1) unstable; urgency=medium . * Team upload. * New upstream version 2.28.0 * d/control: Run dh-update-R r-bioc-iranges (2.26.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * Provide autopkgtest-pkg-r.conf to make sure runit will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-iranges (2.24.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.5.1 (routine-update) r-bioc-iranges (2.24.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) r-bioc-iranges (2.22.2-1) unstable; urgency=medium . * Team upload. * New upstream version * Testsuite: autopkgtest-pkg-r (routine-update) r-bioc-iranges (2.22.1-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Rules-Requires-Root: no (routine-update) * Remove tabs from debian/copyright. r-bioc-iranges (2.20.2-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-iranges (2.20.1-2) unstable; urgency=medium . * Team upload . [ Dylan Aïssi ] * Add salsa-ci.yml * Update autopkgtests r-bioc-iranges (2.20.1-1) unstable; urgency=medium . * Team upload. * New upstream version * debian/copyright: Use spaces rather than tabs in continuation lines. r-bioc-iranges (2.20.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.4.1 r-bioc-iranges (2.18.3-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (2.18.2-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.0 r-bioc-iranges (2.18.1-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.3.0 r-bioc-iranges (2.16.0-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends * Remove trailing whitespace in debian/copyright r-bioc-iranges (2.14.12-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (2.14.11-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.2.1 r-bioc-iranges (2.14.10-2) unstable; urgency=medium . * Standards-Version: 4.1.5 r-bioc-iranges (2.14.10-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends r-bioc-iranges (2.14.8-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (2.14.7-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (2.14.4-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (2.14.1-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-iranges (2.14.1-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends r-bioc-iranges (2.14.0-1) unstable; urgency=medium . * New upstream version * debhelper 11 * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 * Secure URI in watch file r-bioc-iranges (2.12.0-2) unstable; urgency=medium . * Do not symlink non-existing doc Closes: #855625 * Standards-Version: 4.1.2 r-bioc-iranges (2.12.0-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (2.10.5-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Standards-Version: 4.1.1 * Build-Depends: r-bioc-biocgenerics (>= 0.22.1) * Remove unnecessary testsuite autopkgtest-header r-bioc-iranges (2.10.2-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.1.0 r-bioc-iranges (2.10.1-1) unstable; urgency=medium . * Team upload * New upstream version * Bump versioned Build-Depends: r-bioc-s4vectors (>= 0.14.0) r-bioc-iranges (2.8.1-1) unstable; urgency=medium . * New upstream version * debhelper 10 * d/watch: version=4 r-bioc-iranges (2.8.0-1) unstable; urgency=medium . * New upstream version (bump versioned Build-Depends) * Convert to dh-r * Generic BioConductor homepage r-bioc-iranges (2.6.1-1) unstable; urgency=medium . * New upstream version * Versioned (Build-)Depends r-bioc-s4vectors r-bioc-iranges (2.6.0-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-iranges (2.4.7-1) unstable; urgency=medium . * New upstream version * Fix versioned depends * cme fix dpkg-control r-bioc-iranges (2.4.1-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (2.2.7-1) unstable; urgency=medium . * New upstream version * Fixed watch file * versioned Depends on r-bioc-s4vectors r-bioc-iranges (2.2.5-1) unstable; urgency=medium . * New upstream version * Requires S4Vectors (>= 0.6.1) r-bioc-iranges (2.2.4-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (2.2.1-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (2.0.0-1) experimental; urgency=medium . * New upstream version * cme fix dpkg-control * New (Build-)Depends: r-bioc-s4vectors r-bioc-iranges (1.22.10-1) unstable; urgency=medium . * New upstream version r-bioc-iranges (1.22.8-1) unstable; urgency=medium . * New upstream version * Bump versioned (Build-)Depends from r-bioc-biocgenerics to >= 0.9.1 r-bioc-iranges (1.20.6-2) unstable; urgency=medium . [ Martin Pitt ] * debian/tests/control: Add missing r-cran-runit and r-bioc-xvector test dependencies, and allow stderr output. Closes: #735546 . [ Andreas Tille ] * Standards-Version: 3.9.5 r-bioc-iranges (1.20.6-1) unstable; urgency=low . * New upstream version * debian/README.test: More detailed testing suggested * debian/tests: Add unit test r-bioc-iranges (1.20.4-1) unstable; urgency=low . * New upstream version * debian/{control/copyright}: Fixed homepage * debian/control: Versioned (Build-)Depends r-bioc-iranges (1.18.3-1) unstable; urgency=low . * Initial release (closes: #720537) r-bioc-limma (3.56.2+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-lpsymphony (1.28.1+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-makecdfenv (1.76.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Drop manual autopkgtest configuration in favour of autopkgtest-pkg-r r-bioc-matrixgenerics (1.12.3-1) unstable; urgency=medium . * New upstream version r-bioc-matrixgenerics (1.12.2-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-mergeomics (1.28.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-metapod (1.8.0+dfsg-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-mofa (1.6.1+dfsg-11) unstable; urgency=medium . * Team upload. * Build with 3.17 BioC API r-bioc-mofa (1.6.1+dfsg-10) unstable; urgency=medium . * Team upload * Rebuild to fix the missing python3-h5py dependency Closes: #1030514 r-bioc-mofa (1.6.1+dfsg-9) unstable; urgency=medium . * Team upload. * Really rebuild with 3.16 bioc API * Standards-Version: 4.6.2 (routine-update) r-bioc-mofa (1.6.1+dfsg-8) unstable; urgency=medium . * Team upload. * Build with 3.16 BioC API Closes: #1024754 * Reduce piuparts noise in transitions (routine-update) r-bioc-mofa (1.6.1+dfsg-7) unstable; urgency=medium . * Team upload. * Really rebuild with 3.15 bioc API r-bioc-mofa (1.6.1+dfsg-6) unstable; urgency=medium . * Team upload. * Rebuild for Bioc 3.15 transition. * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-mofa (1.6.1+dfsg-5) unstable; urgency=medium . * Team upload. * Really build for 3.14 bioc api r-bioc-mofa (1.6.1+dfsg-4) unstable; urgency=medium . * Team upload. * Build for r-api-bioc-3.14 r-bioc-mofa (1.6.1+dfsg-3) unstable; urgency=medium . * Team Upload. * Build for r-api-bioc-3.13 r-bioc-mofa (1.6.1+dfsg-2) unstable; urgency=medium . [ Andreas Tille ] * Team upload. * Upstream has replaced MOFA by MOFA2. Thus we can not check for new upstream any more and use a fake watch file * Standards-Version: 4.6.0 . [ Steffen Moeller ] * Hint that MOFA is outdated r-bioc-mofa (1.6.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-bioc-mofa (1.4.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-mofa (1.2.0+dfsg-2) unstable; urgency=medium . * Team upload. * Fix watch file * Rules-Requires-Root: no (routine-update) * Section: python for Python package r-bioc-mofa (1.2.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #940513) Reupload, thanks got go FTPmaster Thorsten for his scrutiny. And yet another upload - dh-r not detecting the L in LGPL? r-bioc-monocle (2.28.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-multiassayexperiment (1.26.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-multiassayexperiment (1.24.0+dfsg-2) unstable; urgency=medium . * Team upload. * Add available Suggests to Test-Depends r-bioc-multiassayexperiment (1.24.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends (routine-update) * Reduce piuparts noise in transitions (routine-update) * Build-Depends: r-bioc-biocbaseutils Closes: #1024748 r-bioc-multiassayexperiment (1.22.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-multiassayexperiment (1.20.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version 1.20.0+dfsg * d/control: Run dh-update-R r-bioc-multiassayexperiment (1.18.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-genomicranges and r-bioc-s4vectors. * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-multiassayexperiment (1.16.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-bioc-multiassayexperiment (1.14.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-multiassayexperiment (1.12.6+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-multiassayexperiment (1.12.5+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Rules-Requires-Root: no (routine-update) r-bioc-multiassayexperiment (1.12.4+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-multiassayexperiment (1.12.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version. * Fix autopkgtests. r-bioc-multiassayexperiment (1.12.2+dfsg-1) unstable; urgency=medium . * New upstream version * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * Updated d/u/metadata with ref to conda and bio.tools * Standards-Version: 4.5.0 r-bioc-multiassayexperiment (1.12.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-multiassayexperiment (1.12.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends r-bioc-multiassayexperiment (1.10.4+dfsg-2) unstable; urgency=medium . * Team upload. * Standards-Version: 4.4.1 * Trim trailing whitespace. r-bioc-multiassayexperiment (1.10.4+dfsg-1) unstable; urgency=medium . * Initial release (closes: #940493) r-bioc-multtest (2.56.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Add debian/tests/autopkgtest-pkg-r.conf r-bioc-noiseq (2.44.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-oligo (1.64.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-oligo (1.62.2+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-oligo (1.62.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-oligo (1.62.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-oligo (1.60.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version 1.60.0+ds * Bump Standards-Version to 4.6.1 (no changes needed) r-bioc-oligo (1.58.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-oligo (1.56.0+ds-2) unstable; urgency=medium . * Team upload. * Prevent RUnit from writing to /usr r-bioc-oligo (1.56.0+ds-1) unstable; urgency=medium . * Team upload. * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove trailing whitespace in debian/changelog (routine-update) * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r * Remove test needing package maqcExpression4plex r-bioc-oligo (1.54.1+ds-2) unstable; urgency=medium . * Team upload. * debhelper-compat 13 (routine-update) * Remove trailing whitespace in debian/rules (routine-update) * Remove test requiring not yet packaged oligoData * Exclude test downloading external data r-bioc-oligo (1.54.1+ds-1) unstable; urgency=medium . * Initial release (closes: #975328) r-bioc-oligoclasses (1.62.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-oligoclasses (1.60.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-oligoclasses (1.58.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) r-bioc-oligoclasses (1.56.0-1) unstable; urgency=medium . * Team upload. * New upstream version 1.56.0 r-bioc-oligoclasses (1.54.0-5) unstable; urgency=medium . * Team upload * Exclude further tests * Do not try to write test results to /usr r-bioc-oligoclasses (1.54.0-4) unstable; urgency=medium . * Team upload. * Exclude test requiring package pd.mapping50k.hind240 and pd.mapping50k.xba240 r-bioc-oligoclasses (1.54.0-3) unstable; urgency=medium . * Team upload. * Autopkgtest: extra_restrictions=needs-internet * Disable reprotest r-bioc-oligoclasses (1.54.0-2) unstable; urgency=medium . * Provide autopkgtest-pkg-r.conf to make sure runit will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-oligoclasses (1.54.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-biocgenerics, r-bioc-genomicranges and r-bioc-iranges. r-bioc-oligoclasses (1.52.0-2) unstable; urgency=medium . * Team upload. * debhelper-compat 13 (routine-update) * Add manual autopkgtest since autopkgtest-pkg-r fails to install RUnit * Remove test requiring not yet packaged genomewidesnp6Crlmm r-bioc-oligoclasses (1.52.0-1) unstable; urgency=medium . * Initial release (closes: #975258) r-bioc-pcamethods (1.92.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Convert from d/t/control to d/t/autopkgtest-pkg-r.conf r-bioc-pfamanalyzer (1.0.1+dfsg-2) unstable; urgency=medium . * Source-only upload * Add autopkgtest-pkg-r.conf r-bioc-pfamanalyzer (1.0.1+dfsg-1) unstable; urgency=medium . * Initial release (closes: #1042422) r-bioc-phyloseq (1.44.0+dfsg-1) unstable; urgency=medium . * Disable reprotest * Mention all Suggests as Test-Depends * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-phyloseq (1.42.0+dfsg-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-phyloseq (1.40.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * dh-update-R to update Build-Depends (routine-update) * Remove also README.html since it contains compressed JS r-bioc-phyloseq (1.38.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) * Manually fix version string of r-cran-ade4 r-bioc-phyloseq (1.36.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Set upstream metadata fields: Bug-Submit, Repository, Repository-Browse. * Remove constraints unnecessary since buster: + Build-Depends: Drop versioned constraint on r-bioc-biobase, r-bioc-biocgenerics, r-bioc-biostrings, r-cran-ape, r-cran-data.table, r-cran-foreach, r-cran-ggplot2, r-cran-plyr, r-cran-reshape2, r-cran-scales and r-cran-vegan. * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-phyloseq (1.34.0+dfsg-1) unstable; urgency=medium . [ Dylan Aïssi ] * New upstream version * debhelper-compat 13 (routine-update) . [ Andreas Tille ] * Standards-Version: 4.5.1 (routine-update) r-bioc-phyloseq (1.32.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-phyloseq (1.30.0+dfsg-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g * Set upstream metadata fields: Bug-Database. * Remove obsolete fields Name, Contact from debian/upstream/metadata. r-bioc-phyloseq (1.28.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends r-bioc-phyloseq (1.26.1+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.3.0 * Remove trailing whitespace in debian/copyright r-bioc-phyloseq (1.26.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-phyloseq (1.24.2+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends r-bioc-phyloseq (1.24.0+dfsg-1) unstable; urgency=medium . * Rebuild for R 3.5 transition * dh-update-R to update Build-Depends * Manually change r-cran-ade4 (>= 1.7.4) to (>= 1.7-4) since DESCRIPTION is using wrong version string * Remove autogenerated HTML docs since it is including compressed JS r-bioc-phyloseq (1.24.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-phyloseq (1.24.0-1) unstable; urgency=medium . * New upstream version * debhelper 11 * Maintainer: Debian R Packages Maintainers * dh-update-R to update Build-Depends * Manually fix versioned Depends: r-cran-ade4 (s/1.7.4/1.7-4/) * Standards-Version: 4.1.4 r-bioc-phyloseq (1.22.3-1) unstable; urgency=medium . * New upstream version * Secure URI in watch file r-bioc-phyloseq (1.20.0-2) unstable; urgency=medium . * Standards-Version: 4.1.1 r-bioc-phyloseq (1.20.0-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Standards-Version: 4.1.0 (nn changes needed) * Add debian/README.source to document binary files r-bioc-phyloseq (1.19.1-2) unstable; urgency=medium . * Fix versioned depends from r-cran-ade4 Closes: #850767 r-bioc-phyloseq (1.19.1-1) unstable; urgency=medium . * New upstream version r-bioc-phyloseq (1.18.1-1) unstable; urgency=medium . * New upstream version * debhelper 10 r-bioc-phyloseq (1.18.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage * d/watch: version=4 r-bioc-phyloseq (1.16.2-1) unstable; urgency=low . * Initial release (closes: #837600) r-bioc-preprocesscore (1.62.1+ds-1) unstable; urgency=medium . * New upstream version * Drop debian/tests/control in favour of Testsuite: autopkgtest-pkg-r r-bioc-progeny (1.22.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Convert from d/t/control to d/t/autopkgtest-pkg-r.conf r-bioc-protgenerics (1.32.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-pwmenrich (4.36.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-pwmenrich (4.34.0-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-pwmenrich (4.32.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-pwmenrich (4.30.0-1) unstable; urgency=medium . * Disable reprotest * New upstream version r-bioc-pwmenrich (4.28.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-pwmenrich (4.26.0-1) unstable; urgency=medium . * New upstream version r-bioc-pwmenrich (4.24.2-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-bioc-pwmenrich (4.23.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-pwmenrich (4.22.0-2) unstable; urgency=medium . * Trim trailing whitespace. r-bioc-pwmenrich (4.22.0-1) unstable; urgency=medium . * Initial release (closes: #954848) r-bioc-qtlizer (1.14.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-qtlizer (1.12.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-qtlizer (1.10.0+dfsg-1) unstable; urgency=medium . * Team upload. * Disable reprotest * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-qtlizer (1.8.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-qtlizer (1.8.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * dh-update-R to update Build-Depends (routine-update) * Manually re-add Build-Depends: r-cran-knitr and r-cran-markdown to rebuild the docs * Add marker to not delete the needed Build-Depends r-bioc-qtlizer (1.6.0+dfsg-2) unstable; urgency=medium . * Re-add needed B-D. Fix FTBFS r-bioc-qtlizer (1.6.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Remove trailing whitespace in debian/copyright (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * Provide autopkgtest-pkg-r.conf to make sure Test-Depends will be found r-bioc-qtlizer (1.4.0+dfsg-2) unstable; urgency=medium . * Source-only upload for testing migration. r-bioc-qtlizer (1.4.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #986052) r-bioc-qusage (2.34.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-qvalue (2.32.0-1) unstable; urgency=medium . * Team Upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-rbgl (1.76.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Remove libboost-dev from Build-Depends * Remove autogenerated HTML docs since it is including compressed JS r-bioc-residualmatrix (1.10.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-residualmatrix (1.8.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-residualmatrix (1.6.1+dfsg-2) unstable; urgency=medium . * Team upload. * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-residualmatrix (1.6.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-residualmatrix (1.6.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-residualmatrix (1.4.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-residualmatrix (1.2.0+dfsg-2) unstable; urgency=medium . * Source-only upload. r-bioc-residualmatrix (1.2.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #994615) r-bioc-rhdf5 (2.44.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-rhdf5filters (1.12.1+dfsg-2) unstable; urgency=medium . * Team Upload. * Update patch to also copy blosc user libdir. r-bioc-rhdf5filters (1.12.1+dfsg-1) unstable; urgency=medium . * Team upload. . [ Andreas Tile ] * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Build-Depends: libzstd-dev * Remove zstd code copy from upstream source . [ Nilesh Patra ] * Fix build system to work with Debian packaged zstd r-bioc-rhdf5lib (1.22.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Drop vignette test in favour of autotest-pkg-r * Reduce piuparts noise in transitions (routine-update) * Accept version 1.10.8 of libhdf5 in test Closes: #1033854 r-bioc-rhtslib (2.2.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Add debian/tests/autopkgtest-pkg-r.conf r-bioc-rots (1.28.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-rsubread (2.14.2-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-rwikipathways (1.20.0+dfsg-1) unstable; urgency=medium . * lintian-overrides (see lintian bug #1017966) * Drop debian/tests/control and rely on autopkgtest-pkg-r * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-rwikipathways (1.18.0+dfsg-1) unstable; urgency=medium . * New upstream version * Set upstream metadata fields: Bug-Database, Bug-Submit. r-bioc-rwikipathways (1.16.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-rwikipathways (1.14.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-rwikipathways (1.12.0+dfsg-1) unstable; urgency=medium . * Team Upload. [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Disable reprotest . [ Nilesh Patra ] * d/tests/autopkgtest-pkg-r.conf: test depends on testthat r-bioc-rwikipathways (1.10.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-rwikipathways (1.8.5+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-rwikipathways (1.8.4+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-rwikipathways (1.8.3+dfsg-1) unstable; urgency=medium . * Add upstream metadata * New upstream version * debhelper-compat 13 (routine-update) * Rules-Requires-Root: no (routine-update) * Trim trailing whitespace. r-bioc-rwikipathways (1.6.1+dfsg-1) unstable; urgency=medium . * Initial release (closes: #950785) r-bioc-s4arrays (1.0.5+dfsg-1) unstable; urgency=medium . * Source-only upload * New upstream version * dh-update-R to update Build-Depends (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse. r-bioc-s4arrays (1.0.4+dfsg-1) unstable; urgency=medium . * Initial release (closes: #1041598) r-bioc-s4vectors (0.38.1+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-s4vectors (0.36.1-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-s4vectors (0.36.0-1) unstable; urgency=medium . * New upstream version r-bioc-s4vectors (0.34.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-s4vectors (0.32.4-2) unstable; urgency=medium . * Team upload. * Re-build with R 4.2.0-1 r-bioc-s4vectors (0.32.4-1) unstable; urgency=medium . * Team Upload. * New upstream version 0.32.4 * Add upstream commits as patch to fix autopkgtest r-bioc-s4vectors (0.32.3-1) unstable; urgency=medium . * New upstream version r-bioc-s4vectors (0.30.2-1) unstable; urgency=medium . * New upstream version r-bioc-s4vectors (0.30.1-2) unstable; urgency=medium . * Provide autopkgtest-pkg-r.conf to make sure Test-Depends will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-s4vectors (0.30.1-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-s4vectors (0.30.0-1) unstable; urgency=medium . * Team upload. [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-s4vectors (0.28.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.5.1 (routine-update) r-bioc-s4vectors (0.28.0-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-bioc-s4vectors (0.26.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-s4vectors (0.26.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-s4vectors (0.24.4-1) unstable; urgency=medium . * Team upload. * New upstream version * Testsuite: autopkgtest-pkg-r (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-s4vectors (0.24.3-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.5.0 (routine-update) r-bioc-s4vectors (0.24.2-2) unstable; urgency=medium . * Team upload * Bump Breaks: r-bioc-iranges (<< 2.20.2~) r-bioc-s4vectors (0.24.2-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-s4vectors (0.24.1-2) unstable; urgency=medium . * Team upload. * Fix autopkgtests (Closes: #947004). r-bioc-s4vectors (0.24.1-1) unstable; urgency=medium . * New upstream version * debian/copyright: use spaces rather than tabs to start continuation lines. r-bioc-s4vectors (0.24.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.4.1 r-bioc-s4vectors (0.22.1-1) unstable; urgency=medium . * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.0 r-bioc-s4vectors (0.22.0-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.3.0 r-bioc-s4vectors (0.20.1-2) unstable; urgency=medium . * Team upload. * Bump version of broken packages. (Closes: #913305) Breaks: r-bioc-genomicalignments (<< 1.18~) r-bioc-iranges (<< 2.16~) r-bioc-shortread (<< 1.40~) r-bioc-variantannotation (<< 1.28~) r-bioc-s4vectors (0.20.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-s4vectors (0.20.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 * Remove trailing whitespace in debian/copyright r-bioc-s4vectors (0.18.3-1) unstable; urgency=medium . * New upstream version r-bioc-s4vectors (0.18.2-1) unstable; urgency=medium . * New upstream version r-bioc-s4vectors (0.18.1-4) unstable; urgency=medium . * Team upload * Additional breaks: r-bioc-genomicalignments (<< 1.16~) r-bioc-shortread (<< 1.38~) r-bioc-variantannotation (<< 1.26~) r-bioc-s4vectors (0.18.1-3) unstable; urgency=medium . * Team upload * Indicate that this version breaks r-bioc-iranges (<< 2.14~) r-bioc-s4vectors (0.18.1-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-s4vectors (0.18.1-1) unstable; urgency=medium . * New upstream version r-bioc-s4vectors (0.18.0-1) unstable; urgency=medium . * New upstream version * debhelper 11 * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 * Secure URI in watch file r-bioc-s4vectors (0.16.0-1) unstable; urgency=medium . * New upstream version * Bump versioned Build-Depends: r-bioc-biocgenerics (>= 0.23.3) r-bioc-s4vectors (0.14.7-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Standards-Version: 4.1.1 * Build-Depends: r-bioc-biocgenerics (>= 0.22.1) * Remove unnecessary testsuite autopkgtest-header r-bioc-s4vectors (0.14.3-1) unstable; urgency=medium . * Team upload * New upstream version r-bioc-s4vectors (0.14.1-1) unstable; urgency=medium . * Team upload * New upstream version * Bump versioned Build-Depends: r-bioc-biocgenerics (>= 0.21.1) r-bioc-s4vectors (0.12.1-2) unstable; urgency=medium . * Add missing dependency for autopkgtest: r-bioc-genomicranges r-bioc-s4vectors (0.12.1-1) unstable; urgency=medium . * New upstream version * debhelper 10 * d/watch: version=4 r-bioc-s4vectors (0.12.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-s4vectors (0.10.2-1) unstable; urgency=medium . * New upstream version r-bioc-s4vectors (0.10.0-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-s4vectors (0.8.11-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-s4vectors (0.8.0-1) unstable; urgency=medium . * New upstream version * Bumped versioned Build-Depends and Recommends r-bioc-s4vectors (0.6.6-1) unstable; urgency=medium . * New upstream version * Fixed watch file r-bioc-s4vectors (0.6.2-1) unstable; urgency=medium . * New upstream version r-bioc-s4vectors (0.6.0-1) unstable; urgency=medium . * New upstream version r-bioc-s4vectors (0.4.0-1) experimental; urgency=medium . * Initial release (closes: #765603) r-bioc-saturn (1.8.0+dfsg-3) unstable; urgency=medium . * Fix Build-Depends Closes: #1043439 r-bioc-saturn (1.8.0+dfsg-2) unstable; urgency=medium . * Source-only upload. r-bioc-saturn (1.8.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #1042421) r-bioc-scaledmatrix (1.8.1+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-scaledmatrix (1.6.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-scaledmatrix (1.4.1+dfsg-1) unstable; urgency=medium . * Team Upload. * New upstream version 1.4.1+dfsg r-bioc-scaledmatrix (1.4.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-scaledmatrix (1.2.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * Trim trailing whitespace. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-scaledmatrix (1.0.0+dfsg-2) unstable; urgency=medium . * Team upload. + Source-only Upload for testing migration r-bioc-scaledmatrix (1.0.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #993771) r-bioc-seqlogo (1.66.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-singlecellexperiment (1.22.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) r-bioc-singlecellexperiment (1.20.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-singlecellexperiment (1.18.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-singlecellexperiment (1.18.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-singlecellexperiment (1.16.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version 1.16.0+ds r-bioc-singlecellexperiment (1.14.1+ds1-1) unstable; urgency=medium . * Drop another doc with compressed JS * Disable reprotest r-bioc-singlecellexperiment (1.14.1+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-singlecellexperiment (1.12.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-singlecellexperiment (1.10.1+ds-2) unstable; urgency=medium . * Team upload. * debhelper-compat 13 (routine-update) * Trim trailing whitespace. r-bioc-singlecellexperiment (1.10.1+ds-1) unstable; urgency=medium . * Initial release (closes: #969049) r-bioc-snpstats (1.50.0+dfsg-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) * Convert d/t/control to d/t/autopkgtest-pkg-r.conf r-bioc-sparsematrixstats (1.12.2+dfsg-1) unstable; urgency=medium . * Rebuild against latest r-base Closes: #1039641 * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-sparsematrixstats (1.10.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-sparsematrixstats (1.8.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-sparsematrixstats (1.6.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version 1.6.0+dfsg * d/control: Run dh-update-R r-bioc-sparsematrixstats (1.4.2+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * Test-Depends: r-cran-testthat r-bioc-sparsematrixstats (1.2.1+dfsg-4) unstable; urgency=high . * Team upload. * debian/docs: Removed, no longer relevant r-bioc-sparsematrixstats (1.2.1+dfsg-3) unstable; urgency=high . * Team upload. * Delete the manual autopkgtests, the automatic ones do the same thing. r-bioc-sparsematrixstats (1.2.1+dfsg-2) unstable; urgency=high . * Team upload. * Tighten dependency on r-cran-matrixstats r-bioc-sparsematrixstats (1.2.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-sparsematrixstats (1.2.0+dfsg-4) unstable; urgency=medium . * Team upload. * Add patches from upstream to fix support for non-x86 architectures. r-bioc-sparsematrixstats (1.2.0+dfsg-3) unstable; urgency=medium . * Team upload. * debian/control: restrict to architectures where the autotests pass. * Standards-Version: 4.5.1 (routine-update) r-bioc-sparsematrixstats (1.2.0+dfsg-2) unstable; urgency=medium . * debhelper-compat 13 (routine-update) * Trim trailing whitespace. r-bioc-sparsematrixstats (1.2.0+dfsg-1) unstable; urgency=medium . * Initial release (closes: #973810) r-bioc-stringdb (2.12.1-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-stringdb (2.12.0-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-summarizedexperiment (1.30.2+dfsg-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-summarizedexperiment (1.28.0+dfsg-1) unstable; urgency=medium . * New upstream version * Reduce piuparts noise in transitions (routine-update) r-bioc-summarizedexperiment (1.26.1+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-bioc-summarizedexperiment (1.24.0+dfsg-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends (routine-update) r-bioc-summarizedexperiment (1.22.0+dfsg-1) unstable; urgency=medium . [ Steffen Moeller ] * New upstream version * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (routine-update) * No tab in license text (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * d/u/metadata: - Remove obsolete fields Contact, Name (already present in machine-readable debian/copyright). - Added registry entries . [ Andreas Tille ] * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-summarizedexperiment (1.20.0+dfsg-1) unstable; urgency=medium . * New upstream version r-bioc-summarizedexperiment (1.18.2+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * debhelper-compat 13 (routine-update) r-bioc-summarizedexperiment (1.18.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) r-bioc-summarizedexperiment (1.16.1+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version r-bioc-summarizedexperiment (1.16.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * Standards-Version: 4.4.1 r-bioc-summarizedexperiment (1.14.1+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper-compat 12 * Standards-Version: 4.4.0 * Set upstream metadata fields: Contact, Name. r-bioc-summarizedexperiment (1.14.0+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.3.0 * Remove trailing whitespace in debian/copyright r-bioc-summarizedexperiment (1.12.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-summarizedexperiment (1.10.1+dfsg-1) unstable; urgency=medium . * Rebuild for R 3.5 transition * Remove autogenerated HTML docs since it is including compressed JS r-bioc-summarizedexperiment (1.10.1-1) unstable; urgency=medium . * New upstream version r-bioc-summarizedexperiment (1.10.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-summarizedexperiment (1.10.0-1) unstable; urgency=medium . * New upstream version * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 r-bioc-summarizedexperiment (1.8.1-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control * debhelper 11 r-bioc-summarizedexperiment (1.8.0-1) unstable; urgency=medium . * New upstream version * Bump versioned Build-Depends: r-bioc-genomicranges (>= 1.29.14), r-bioc-delayedarray (>= 0.3.20) * Secure URI in watch file r-bioc-summarizedexperiment (1.6.5-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Standards-Version: 4.1.1 * cme fix dpkg-control r-bioc-summarizedexperiment (1.6.3-1) unstable; urgency=medium . * Team upload * New upstream version * Add new Build-Depends: r-bioc-delayedarray r-bioc-summarizedexperiment (1.4.0-2) unstable; urgency=medium . * Exclude more parts of test suite which fail due to missing data package * debhelper 10 * d/watch: version=4 r-bioc-summarizedexperiment (1.4.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage * New Build-Depends: r-cran-matrix * New versioned Build-Depends: r-bioc-s4vectors (>= 0.11.7), r-bioc-iranges (>= 2.7.2), r-bioc-summarizedexperiment (1.2.0-1) unstable; urgency=medium . * New upstream version * Fix versioned Depends r-bioc-summarizedexperiment (1.0.2-3) unstable; urgency=medium . * Skip test needing unpackaged database (thanks to Gordon Ball for the hint) r-bioc-summarizedexperiment (1.0.2-2) unstable; urgency=medium . * Add missing Depends to autopkgtest r-bioc-summarizedexperiment (1.0.2-1) unstable; urgency=medium . * New upstream version * cme fix dpkg-control * Fix dependencies of autopkgtest * Increased versioned Depends r-bioc-genomicranges r-bioc-summarizedexperiment (1.0.0-1) unstable; urgency=low . * Initial release (closes: #803616) r-bioc-tcgabiolinksgui.data (1.20.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Add autopkgtest-pkg-r.conf r-bioc-tximport (1.28.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Update d/t/autopkgtest-pkg-r.conf r-bioc-tximportdata (1.28.0+ds-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Add debian/tests/autopkgtest-pkg-r.conf r-bioc-wrench (1.18.0+dfsg-1) unstable; urgency=medium . * Disable reprotest * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) * Add debian/tests/autopkgtest-pkg-r.conf r-bioc-xvector (0.40.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) * Reduce piuparts noise in transitions (routine-update) r-bioc-xvector (0.38.0-1) unstable; urgency=medium . * New upstream version r-bioc-xvector (0.36.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * Reorder sequence of d/control fields by cme (routine-update) r-bioc-xvector (0.34.0-1) unstable; urgency=medium . * Team upload. * New upstream version 0.34.0 r-bioc-xvector (0.32.0-1) unstable; urgency=medium . [ Steffen Moeller ] * Team upload. * New upstream version * d/u/metadata: Added ref to guix * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (routine-update) * watch file standard 4 (routine-update) . [ Andreas Tille ] * Provide autopkgtest-pkg-r.conf to make sure testthat will be found * Drop debian/tests/control and rely on autopkgtest-pkg-r r-bioc-xvector (0.30.0-1) unstable; urgency=medium . * New upstream version * debhelper-compat 13 (routine-update) * Testsuite: autopkgtest-pkg-r (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-bioc-xvector (0.28.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * debian/copyright: use spaces rather than tabs to start continuation lines. r-bioc-xvector (0.26.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Fixed debian/watch for BioConductor * debhelper-compat 12 * Standards-Version: 4.4.1 r-bioc-xvector (0.24.0-1) unstable; urgency=medium . [ Dylan Aïssi ] * Remove patch and use r-bioc-zlibbioc. . [ Andreas Tille ] * New upstream version * debhelper 12 * Standards-Version: 4.3.0 r-bioc-xvector (0.22.0-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.2.1 r-bioc-xvector (0.20.0-2) unstable; urgency=medium . * Fix Maintainer and Vcs-fields r-bioc-xvector (0.20.0-1) unstable; urgency=medium . * New upstream version * debhelper 11 * dh-update-R to update Build-Depends * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 * Secure URI in watch file r-bioc-xvector (0.18.0-1) unstable; urgency=medium . * New upstream version * Moved packaging from SVN to Git * Standards-Version: 4.1.1 * debhelper 10 r-bioc-xvector (0.16.0-1) unstable; urgency=medium . * Team upload * New upstream version r-bioc-xvector (0.14.0-1) unstable; urgency=medium . * New upstream version * Convert to dh-r * Generic BioConductor homepage r-bioc-xvector (0.12.0-2) unstable; urgency=medium . * Fix autopkgtest r-bioc-xvector (0.12.0-1) unstable; urgency=medium . * New upstream version * Fix versioned Depends * cme fix dpkg-control r-bioc-xvector (0.10.0-1) unstable; urgency=medium . * New upstream version * Use Debian packaged zlib r-bioc-xvector (0.8.0-1) unstable; urgency=medium . * New upstream version r-bioc-xvector (0.6.0-1) experimental; urgency=medium . * New upstream version * cme fix dpkg-control r-bioc-xvector (0.4.0-1) unstable; urgency=medium . * New upstream version * Versioned Build-Depends: r-bioc-iranges (>= 1.22.8) r-bioc-xvector (0.2.0-2) unstable; urgency=medium . [ Martin Pitt ] * debian/tests/control: Add missing r-cran-runit test dependency, and allow stderr output. Closes: #735537 . [ Andreas Tille ] * Standards-Version: 3.9.5 r-bioc-xvector (0.2.0-1) unstable; urgency=low . * Initial release (closes: #728799) r-bioc-zlibbioc (1.46.0+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) * Reduce piuparts noise in transitions (routine-update) r-cran-restfulr (0.0.15-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.1 (routine-update) * dh-update-R to update Build-Depends (routine-update) r-cran-restfulr (0.0.13-2) unstable; urgency=medium . * Packaging update * Standards-Version: 4.6.0 (routine-update) * dh-update-R to update Build-Depends (3) (routine-update) * Trim trailing whitespace. * Set upstream metadata fields: Archive. r-cran-restfulr (0.0.13-1) unstable; urgency=medium . * Initial release (closes: #993812) r-other-ascat (3.1.2-1) unstable; urgency=medium . * New upstream version * Set upstream metadata fields: Repository. r-other-ascat (3.1.1-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.2 (routine-update) r-other-ascat (3.0.0-1) unstable; urgency=medium . [ Steffen Moeller ] * Fixed d/watch - new github path . [ Andreas Tille ] * New upstream version * Standards-Version: 4.6.1 (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse. * Manually add Build-Depends (dh-update-R failed since there is no DESCRIPTION file in root dir) * lintian-overrides (see lintian bug #1017966) r-other-ascat (2.5.2-3) unstable; urgency=medium . * Team upload. * Disable Testsuite: autopkgtest-pkg-r. The DESCRIPTION file is in a subfolder that is not (yet) supported by autopkgtest-pkg-r. r-other-ascat (2.5.2-2) unstable; urgency=medium . * debhelper-compat 13 (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. r-other-ascat (2.5.2-1) unstable; urgency=medium . * Initial release (closes: #960408) REMOVED: gnome-multi-writer 3.32.1-1 REMOVED: transmission 4.0.2-1 REMOVED: armnn 20.08-12 REMOVED: guidedog 1.3.0-1 REMOVED: xpra 3.1.3-0.1 REMOVED: hotspot 1.3.0-2 REMOVED: mate-applets 1.26.1-1 REMOVED: modem-manager-gui 0.0.20-5 REMOVED: r-bioc-metagenomeseq 1.40.0-1 REMOVED: libgsecuredelete 0.3-3 REMOVED: mate-system-monitor 1.26.0-1 REMOVED: moc 1:2.6.0~svn-r3005-3 REMOVED: openscap 1.3.8+dfsg-3 REMOVED: gparted 1.3.1-1 REMOVED: caja-dropbox 1.26.0-2 REMOVED: hannah-foo2zjs 1:5 REMOVED: caja-admin 0.0.5-1