Date: 2022-08-09T09:05:55+00:00

Actual source code: test6.c
slepc-3.17.2 2022-08-09
Report Typos and Errors

      1: /*
      2:    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
      3:    SLEPc - Scalable Library for Eigenvalue Problem Computations
      4:    Copyright (c) 2002-, Universitat Politecnica de Valencia, Spain

      6:    This file is part of SLEPc.
      7:    SLEPc is distributed under a 2-clause BSD license (see LICENSE).
      8:    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
      9: */

     11: static char help[] = "Test the NArnoldi solver with a user-provided KSP.\n\n"
     12:   "This is based on ex22.\n"
     13:   "The command line options are:\n"
     14:   "  -n <n>, where <n> = number of grid subdivisions.\n"
     15:   "  -tau <tau>, where <tau> is the delay parameter.\n"
     16:   "  -initv ... set an initial vector.\n\n";

     18: /*
     19:    Solve parabolic partial differential equation with time delay tau

     21:             u_t = u_xx + a*u(t) + b*u(t-tau)
     22:             u(0,t) = u(pi,t) = 0

     24:    with a = 20 and b(x) = -4.1+x*(1-exp(x-pi)).

     26:    Discretization leads to a DDE of dimension n

     28:             -u' = A*u(t) + B*u(t-tau)

     30:    which results in the nonlinear eigenproblem

     32:             (-lambda*I + A + exp(-tau*lambda)*B)*u = 0
     33: */

     35: #include <slepcnep.h>

     37: int main(int argc,char **argv)
     38: {
     39:   NEP            nep;
     40:   KSP            ksp;
     41:   PC             pc;
     42:   Mat            Id,A,B,mats[3];
     43:   FN             f1,f2,f3,funs[3];
     44:   Vec            v0;
     45:   PetscScalar    coeffs[2],b,*pv;
     46:   PetscInt       n=128,nev,Istart,Iend,i,lag;
     47:   PetscReal      tau=0.001,h,a=20,xi;
     48:   PetscBool      terse,initv=PETSC_FALSE;
     49:   const char     *prefix;

     51:   SlepcInitialize(&argc,&argv,(char*)0,help);
     52:   PetscOptionsGetInt(NULL,NULL,"-n",&n,NULL);
     53:   PetscOptionsGetReal(NULL,NULL,"-tau",&tau,NULL);
     54:   PetscOptionsGetBool(NULL,NULL,"-initv",&initv,NULL);
     55:   PetscPrintf(PETSC_COMM_WORLD,"\n1-D Delay Eigenproblem, n=%" PetscInt_FMT ", tau=%g\n\n",n,(double)tau);
     56:   h = PETSC_PI/(PetscReal)(n+1);

     58:   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
     59:       Create a standalone KSP with appropriate settings
     60:      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */

     62:   KSPCreate(PETSC_COMM_WORLD,&ksp);
     63:   KSPSetType(ksp,KSPBCGS);
     64:   KSPGetPC(ksp,&pc);
     65:   PCSetType(pc,PCBJACOBI);
     66:   KSPSetFromOptions(ksp);

     68:   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
     69:      Create nonlinear eigensolver context
     70:      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */

     72:   NEPCreate(PETSC_COMM_WORLD,&nep);

     74:   /* Identity matrix */
     75:   MatCreateConstantDiagonal(PETSC_COMM_WORLD,PETSC_DECIDE,PETSC_DECIDE,n,n,1.0,&Id);
     76:   MatSetOption(Id,MAT_HERMITIAN,PETSC_TRUE);

     78:   /* A = 1/h^2*tridiag(1,-2,1) + a*I */
     79:   MatCreate(PETSC_COMM_WORLD,&A);
     80:   MatSetSizes(A,PETSC_DECIDE,PETSC_DECIDE,n,n);
     81:   MatSetFromOptions(A);
     82:   MatSetUp(A);
     83:   MatGetOwnershipRange(A,&Istart,&Iend);
     84:   for (i=Istart;i<Iend;i++) {
     85:     if (i>0) MatSetValue(A,i,i-1,1.0/(h*h),INSERT_VALUES);
     86:     if (i<n-1) MatSetValue(A,i,i+1,1.0/(h*h),INSERT_VALUES);
     87:     MatSetValue(A,i,i,-2.0/(h*h)+a,INSERT_VALUES);
     88:   }
     89:   MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);
     90:   MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);
     91:   MatSetOption(A,MAT_HERMITIAN,PETSC_TRUE);

     93:   /* B = diag(b(xi)) */
     94:   MatCreate(PETSC_COMM_WORLD,&B);
     95:   MatSetSizes(B,PETSC_DECIDE,PETSC_DECIDE,n,n);
     96:   MatSetFromOptions(B);
     97:   MatSetUp(B);
     98:   MatGetOwnershipRange(B,&Istart,&Iend);
     99:   for (i=Istart;i<Iend;i++) {
    100:     xi = (i+1)*h;
    101:     b = -4.1+xi*(1.0-PetscExpReal(xi-PETSC_PI));
    102:     MatSetValues(B,1,&i,1,&i,&b,INSERT_VALUES);
    103:   }
    104:   MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);
    105:   MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);
    106:   MatSetOption(B,MAT_HERMITIAN,PETSC_TRUE);

    108:   /* Functions: f1=-lambda, f2=1.0, f3=exp(-tau*lambda) */
    109:   FNCreate(PETSC_COMM_WORLD,&f1);
    110:   FNSetType(f1,FNRATIONAL);
    111:   coeffs[0] = -1.0; coeffs[1] = 0.0;
    112:   FNRationalSetNumerator(f1,2,coeffs);

    114:   FNCreate(PETSC_COMM_WORLD,&f2);
    115:   FNSetType(f2,FNRATIONAL);
    116:   coeffs[0] = 1.0;
    117:   FNRationalSetNumerator(f2,1,coeffs);

    119:   FNCreate(PETSC_COMM_WORLD,&f3);
    120:   FNSetType(f3,FNEXP);
    121:   FNSetScale(f3,-tau,1.0);

    123:   /* Set the split operator */
    124:   mats[0] = A;  funs[0] = f2;
    125:   mats[1] = Id; funs[1] = f1;
    126:   mats[2] = B;  funs[2] = f3;
    127:   NEPSetSplitOperator(nep,3,mats,funs,SUBSET_NONZERO_PATTERN);

    129:   /* Customize nonlinear solver; set runtime options */
    130:   NEPSetOptionsPrefix(nep,"check_");
    131:   NEPAppendOptionsPrefix(nep,"myprefix_");
    132:   NEPGetOptionsPrefix(nep,&prefix);
    133:   PetscPrintf(PETSC_COMM_WORLD,"NEP prefix is currently: %s\n\n",prefix);
    134:   NEPSetType(nep,NEPNARNOLDI);
    135:   NEPNArnoldiSetKSP(nep,ksp);
    136:   if (initv) { /* initial vector */
    137:     MatCreateVecs(A,&v0,NULL);
    138:     VecGetArray(v0,&pv);
    139:     for (i=Istart;i<Iend;i++) pv[i-Istart] = PetscSinReal((4.0*PETSC_PI*i)/n);
    140:     VecRestoreArray(v0,&pv);
    141:     NEPSetInitialSpace(nep,1,&v0);
    142:     VecDestroy(&v0);
    143:   }
    144:   NEPSetFromOptions(nep);

    146:   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    147:                       Solve the eigensystem
    148:      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */

    150:   NEPSolve(nep);
    151:   NEPGetDimensions(nep,&nev,NULL,NULL);
    152:   PetscPrintf(PETSC_COMM_WORLD," Number of requested eigenvalues: %" PetscInt_FMT "\n",nev);
    153:   NEPNArnoldiGetLagPreconditioner(nep,&lag);
    154:   PetscPrintf(PETSC_COMM_WORLD," N-Arnoldi lag parameter: %" PetscInt_FMT "\n",lag);

    156:   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    157:                     Display solution and clean up
    158:      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */

    160:   /* show detailed info unless -terse option is given by user */
    161:   PetscOptionsHasName(NULL,NULL,"-terse",&terse);
    162:   if (terse) NEPErrorView(nep,NEP_ERROR_RELATIVE,NULL);
    163:   else {
    164:     PetscViewerPushFormat(PETSC_VIEWER_STDOUT_WORLD,PETSC_VIEWER_ASCII_INFO_DETAIL);
    165:     NEPConvergedReasonView(nep,PETSC_VIEWER_STDOUT_WORLD);
    166:     NEPErrorView(nep,NEP_ERROR_RELATIVE,PETSC_VIEWER_STDOUT_WORLD);
    167:     PetscViewerPopFormat(PETSC_VIEWER_STDOUT_WORLD);
    168:   }
    169:   NEPDestroy(&nep);
    170:   KSPDestroy(&ksp);
    171:   MatDestroy(&Id);
    172:   MatDestroy(&A);
    173:   MatDestroy(&B);
    174:   FNDestroy(&f1);
    175:   FNDestroy(&f2);
    176:   FNDestroy(&f3);
    177:   SlepcFinalize();
    178:   return 0;
    179: }

    181: /*TEST

    183:    test:
    184:       suffix: 1
    185:       args: -check_myprefix_nep_view -check_myprefix_nep_monitor_conv -initv -terse
    186:       filter: grep -v "tolerance" | sed -e "s/[0-9]\.[0-9]*e[+-]\([0-9]*\)/removed/g" -e "s/+0i//g"
    187:       requires: double

    189: TEST*/