MASON SIMULATOR
===============

____INITIALIZING______________________________________________________________

Opening reference and variants file ... OK
Initializing fragment-to-contig distribution ... OK
Initializing simulation threads ... OK
Opening output file simulator.left1.fq ... OK
Opening output file simulator.right1.fq ... OK
Opening output file simulator.out1.sam... OK

____READ SIMULATION___________________________________________________________

Distributing fragments to 2 contigs (1 haplotypes each) ... OK

Simulating Reads:
  1 (allele 1) .. (904 fragments) OK
  2 (allele 1) .. (96 fragments) OK
  Done simulating reads.

Joining temporary files ... OK
