##fileformat=VCFv4.1
##source=GUSTAF
##reference=adeno.fa
##reads=adeno_modified_reads_mates1.fa
##reads=adeno_modified_reads_mates2.fa
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=EVENT,Number=1,Type=String,Description="Event identifier for breakends.">
##INFO=<ID=TARGETPOS,Number=1,Type=String,Description="Target position for duplications.">
##INFO=<ID=DP,Number=1,Type=Integer,Description="Number of Supporting Reads/Read Depth for Variant">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=DUP:TANDEM,Description="Tandem Duplication">
##contig=<ID=gi|9632547|ref|NC_002077.1| Adeno-associated virus - 1, complete genome,length=4718>
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT
gi|9632547|ref|NC_002077.1| Adeno-associated virus - 1, complete genome	3570	.	T	<DEL>	.	PASS	SVTYPE=DEL;SVLEN=-140;DP=2	.	1
gi|9632547|ref|NC_002077.1| Adeno-associated virus - 1, complete genome	3752	.	A	<DEL>	.	PASS	SVTYPE=DEL;SVLEN=-799;DP=1	.	1
