##fileformat=VCFv4.1
##source=mason_variator
##reference=../input/adeno_virus.fa
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=TARGETPOS,Number=1,Type=String,Description="Target position for duplications.">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=DUP,Description="Duplication">
##contig=<ID=gi|56160436|ref|AC_000005.1|,length=34125>
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	simulated
gi|56160436|ref|AC_000005.1|	55	sim_sv_indel_0	GCGTAGTGTGTAATTTGATTGGGTGGAGGTGTGGCTTTGGCGTGCTTGTAAGTTTG	G	.	PASS	SVTYPE=DEL;SVLEN=-55	.	1
gi|56160436|ref|AC_000005.1|	241	sim_sv_indel_1	TGAAATGCGGAAGTGAAAATTGATGACGGCAATTTTATTATAGGCGCGGAATATTTACCGAGGGCAGAGTGAACTCTGAGCCTCTACGTGTGGGTTTCGATACGTGAGCGACGGGGAAACTCCACGTTGGCGCTCAAAGGGCGCGTTTATTGTTCTGTCAGCTGATCGTTTGGGTATTTAATGCCGCCGTGTTCGTCAAGAGGCCACTCTTGA	T	.	PASS	SVTYPE=DEL;SVLEN=-212	.	1
gi|56160436|ref|AC_000005.1|	467	sim_sv_indel_2	G	GAAGTCGCGTGGGTCCGTGTCCGGCCATAAAACAGCCGGGGCAAACAACACTAAGTGTAACGGAGGTGGTACATAAGCTGACCATAGTGCGTTGGCCCGGCTTGTAAGGTAGTATCGAACGTATGCGCAGCTGACCATGCTTCAGGGCTCACTCCC	.	PASS	SVTYPE=INS;SVLEN=155	.	1
gi|56160436|ref|AC_000005.1|	538	sim_sv_indel_3	TCAGGAAGCTGACGACATATTGGAGCATTTGGTGGACAACTTTTTTAACGAGGTACCCAGTGATGATGATCTTTATGTTCCGTCTCTTTACGAACTGTATGATCTTGATGTGGAGTCTGCCGGTGAAGATAATAATGAAC	T	.	PASS	SVTYPE=DEL;SVLEN=-139	.	1
gi|56160436|ref|AC_000005.1|	796	sim_inv_0	A	<INV>	.	PASS	SVTYPE=INV;END=968;SVLEN=172	.	1
gi|56160436|ref|AC_000005.1|	988	sim_dup_0	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=133;END=1121;TARGETPOS=gi|56160436|ref|AC_000005.1|:1174	.	1
gi|56160436|ref|AC_000005.1|	1177	sim_inv_1	A	<INV>	.	PASS	SVTYPE=INV;END=1277;SVLEN=100	.	1
gi|56160436|ref|AC_000005.1|	1307	sim_dup_1	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=76;END=1383;TARGETPOS=gi|56160436|ref|AC_000005.1|:1598	.	1
gi|56160436|ref|AC_000005.1|	1624	sim_inv_2	G	<INV>	.	PASS	SVTYPE=INV;END=1712;SVLEN=88	.	1
gi|56160436|ref|AC_000005.1|	1720	sim_sv_indel_4	GGCTTTTGGCTTCACTAGACCTTTGTTACCACTTGGTGTTTCAGGAAAA	G	.	PASS	SVTYPE=DEL;SVLEN=-48	.	1
gi|56160436|ref|AC_000005.1|	1809	sim_dup_2	G	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=109;END=1918;TARGETPOS=gi|56160436|ref|AC_000005.1|:2168	.	1
gi|56160436|ref|AC_000005.1|	2172	sim_inv_3	T	<INV>	.	PASS	SVTYPE=INV;END=2466;SVLEN=294	.	1
gi|56160436|ref|AC_000005.1|	2489	sim_inv_4	G	<INV>	.	PASS	SVTYPE=INV;END=2697;SVLEN=208	.	1
gi|56160436|ref|AC_000005.1|	2744	sim_inv_5	A	<INV>	.	PASS	SVTYPE=INV;END=2835;SVLEN=91	.	1
gi|56160436|ref|AC_000005.1|	2959	sim_dup_3	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=123;END=3082;TARGETPOS=gi|56160436|ref|AC_000005.1|:3174	.	1
gi|56160436|ref|AC_000005.1|	3192	sim_sv_indel_5	TTCGTCCCATTGTGCTAAATGTAACTGAGGAGCTGAGAAGTGACCACCTTACCCTGTCTTGCCTGCGGACTGACTATGAGTCAAGTGATGAAGACGACAACTGAGGTAAGT	T	.	PASS	SVTYPE=DEL;SVLEN=-110	.	1
gi|56160436|ref|AC_000005.1|	3367	sim_sv_indel_6	C	CACACTGAAATCGATCTAACTGATAGTATGAACGCGTAGTTGCCGTGCGCAAAGCAACCGCCTGGTGATCCTAGCTTTTTCCCATTCAGACGAGGTTGGCAAGTTACTGCGTATTGCATGAGCCAGATAACCCATTGACTTGGCCAGTCCTTTGCAGTCTGATGTACCAATACTCTCGCATATCCGCCGGACACTAAGATCTGGCACCCCTAAAGCTGGGCTTTTTCTGAATTCATCAGGCCGTGAGGCTGGTATGGGGTGCA	.	PASS	SVTYPE=INS;SVLEN=262	.	1
gi|56160436|ref|AC_000005.1|	3394	sim_sv_indel_7	C	CCTAGCAGGGTCTTGACGGTAATAATGCGTGGTTCAAAGGACTTACGGGGAACGTGCACGACTCACCACAAAAATTTACCGTCACAGGTGCGAACTCATAATCCACACGCTCTGGATCCTATCGGATGGGACCTTTAGAATGTTCCGTTTCCCGTCAACTTGCGCAACGTTAGAGATCATAGGA	.	PASS	SVTYPE=INS;SVLEN=183	.	1
gi|56160436|ref|AC_000005.1|	3461	sim_inv_6	G	<INV>	.	PASS	SVTYPE=INV;END=3481;SVLEN=20	.	1
gi|56160436|ref|AC_000005.1|	3496	sim_dup_4	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=53;END=3549;TARGETPOS=gi|56160436|ref|AC_000005.1|:3693	.	1
gi|56160436|ref|AC_000005.1|	3741	sim_sv_indel_8	TATCGCAAAAGGTTGAGGAATTAGCTGATGCTACTACCCATACCCCAGCCCAACCTGTAACCCAATAAAGAAAAAACTTAAATTGAGATGGTG	T	.	PASS	SVTYPE=DEL;SVLEN=-92	.	1
gi|56160436|ref|AC_000005.1|	3841	sim_dup_5	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=69;END=3910;TARGETPOS=gi|56160436|ref|AC_000005.1|:4152	.	1
gi|56160436|ref|AC_000005.1|	4196	sim_sv_indel_9	TTGGCAATGTTACCTGCCAAATCTCTTCTTGGATTCATATTGTGGAGAACCACGAAAACGGTGTAGCCAGTACACTTGGGAAATTTGTCATGGAGTTTAGAAGGAAAGGCATGGAAAAACTTGGAAACGCCTTTGTGACTTCCCAAATTTTCCATACACTCATCCATTATTATGGCAATTGGACCGCGAGCAGCGGCTTGAGCAAAAATGTTTTCTGGATCAGAAACATCATAGTTGTGGTCTAGAGTTAGGTCATC	T	.	PASS	SVTYPE=DEL;SVLEN=-256	.	1
gi|56160436|ref|AC_000005.1|	4472	sim_sv_indel_10	TTAGGACACAGCGTTCCAGATTGTGGAATAATAGTTCCCTCTGGTCCTGGGACATAATTTCCCTCACAAATTTGCATTTCCCAAGATTTAATTTCAGATGGGGGAATCATGTCCACTTGCGGAACAATAAAAAAAACAGTTTCTGGAGCAGGTGTAACCAGCTGGGCAGAAAGCAAATTACGCAACAACTGAGACTTCCCACAGCCAGTGGGTCCATAAATTACCC	T	.	PASS	SVTYPE=DEL;SVLEN=-225	.	1
gi|56160436|ref|AC_000005.1|	4700	sim_inv_7	A	<INV>	.	PASS	SVTYPE=INV;END=4862;SVLEN=162	.	1
gi|56160436|ref|AC_000005.1|	4927	sim_sv_indel_11	G	GCAGAGAATTGATCGTCGACCTCATTGTATTCACGTAACGGGATGAGTTACCAGAACCTACCGTACATGCAGGGCTCATCGAATGCACTCACGAAATGCTGTAACAGCTCGCGCTGCTCAAAGATTGTTCCCGCAACTGGCCAACAGCCCCTTTCAGTTGTCAAATCAACATCCGCGTCGAGGCTAGGTACGGTCGCGGCATTCACCCGTCGGAACTAAACGCCA	.	PASS	SVTYPE=INS;SVLEN=224	.	1
gi|56160436|ref|AC_000005.1|	4954	sim_inv_8	T	<INV>	.	PASS	SVTYPE=INV;END=5207;SVLEN=253	.	1
gi|56160436|ref|AC_000005.1|	5218	sim_sv_indel_12	T	TTTATGAAATGGCCCTGGTCCATGGGTAGAGAGCGAACAGAGATGGAATGACTCATTGACTGGAGGCCGAGAGAGTA	.	PASS	SVTYPE=INS;SVLEN=76	.	1
gi|56160436|ref|AC_000005.1|	5221	sim_sv_indel_13	GACAAAGCCTCTGTAGCGTGGCCTTTAGCCCGTATTTTTCCTTTGGAGGTGCTCCCGCAGTGAGGACACTGAAGGCATTTAAGGGCGTACAGTTTTGGAGCCAAAAAAACAGATTCTGGAGAATAAGCATCTGCGCCACAATAACTACAAACAGTTTCACATTCAACTGACCAGGTCAGCTCAGGACATGATGGATCAAAAACAAGTTTCCCT	G	.	PASS	SVTYPE=DEL;SVLEN=-212	.	1
gi|56160436|ref|AC_000005.1|	5455	sim_inv_9	T	<INV>	.	PASS	SVTYPE=INV;END=5632;SVLEN=177	.	1
gi|56160436|ref|AC_000005.1|	5646	sim_sv_indel_14	ATCGTTGTTAATTAAAGGGTTAGAACTTTCTAAGGTGTGTAAACACATGTCTCCTTCTTCAGCGTCCATGAATGTGATTGGTTTGTAGGTGTAAGTCACGTGTTCACAATTTTCTGGTGGTGGGCTATAAAAAGGGGCGGGTCCTTGGTCTTCATCGCTTTCTTCTGCTTCGCT	A	.	PASS	SVTYPE=DEL;SVLEN=-173	.	1
gi|56160436|ref|AC_000005.1|	5827	sim_sv_indel_15	A	ACTAATATTACAATCTATATGCATGTCTACTTATAGCGCGCACATAAACCAATCATCTCTTCCGGTAGTCAGCGAACTGAAGCGGGTCGGGGAGATTTATCCTCATCTCTCTTCTGGGAGGTAGCTAAGCCAATTTAATCAGACTAGGGACGCGATACTGCACGGCATGTTCCTCACCTGGTGAGCATTGGCGCATTCCATACAGCTTCTAACTCAGATAAGCACTA	.	PASS	SVTYPE=INS;SVLEN=226	.	1
gi|56160436|ref|AC_000005.1|	5881	sim_dup_6	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=151;END=6032;TARGETPOS=gi|56160436|ref|AC_000005.1|:6097	.	1
gi|56160436|ref|AC_000005.1|	6099	sim_inv_10	G	<INV>	.	PASS	SVTYPE=INV;END=6246;SVLEN=147	.	1
gi|56160436|ref|AC_000005.1|	6255	sim_inv_11	A	<INV>	.	PASS	SVTYPE=INV;END=6381;SVLEN=126	.	1
gi|56160436|ref|AC_000005.1|	6400	sim_dup_7	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=24;END=6424;TARGETPOS=gi|56160436|ref|AC_000005.1|:6521	.	1
gi|56160436|ref|AC_000005.1|	6564	sim_sv_indel_16	GCGAACGTAGTCATATAGCTCATGTGAAGGCGCCAGGATGTTGGGCCCAAGATGTGTGCGCTGTGGTTTTTCGGCGCGGTACAAAATTTGTCTGAAAATTGCATGAGAGTTAGAGGAAATGGTAGGACGCTGAAACACATTAAAATGTGCCGCGTCAAGACCCACTGCGTCAGTAACAAACTGGGCGTATGAGCTACGCAGTTTTTCTACCAATGAGGCAGTCACAAGTACATCC	G	.	PASS	SVTYPE=DEL;SVLEN=-234	.	1
gi|56160436|ref|AC_000005.1|	6803	sim_sv_indel_17	CACAATAGTTTAATGTTTCCCCGATAAGATTGTAATTTTTTTCTCCTTTTTTTTTCCATAGTTCTTGATTTAGGAGGTATTCCTCCTTATCCTTCCAGTACTCCTCCAGGGGAAACCCATTT	C	.	PASS	SVTYPE=DEL;SVLEN=-121	.	1
gi|56160436|ref|AC_000005.1|	6974	sim_sv_indel_18	A	AAGGGTCAGCGTTGTGGGTGGGGCGCCACTGAACAGGGCCAACAAGCCGCGCACCGCGTACACATAATATACATTTGTTCTTTGCCATGAGGT	.	PASS	SVTYPE=INS;SVLEN=92	.	1
gi|56160436|ref|AC_000005.1|	6987	sim_dup_8	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=31;END=7018;TARGETPOS=gi|56160436|ref|AC_000005.1|:7263	.	1
gi|56160436|ref|AC_000005.1|	7270	sim_inv_12	A	<INV>	.	PASS	SVTYPE=INV;END=7423;SVLEN=153	.	1
gi|56160436|ref|AC_000005.1|	7431	sim_dup_9	A	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=62;END=7493;TARGETPOS=gi|56160436|ref|AC_000005.1|:7538	.	1
gi|56160436|ref|AC_000005.1|	7562	sim_sv_indel_19	C	CTAGAATCTAGCGTTACCGCGAGAACTTTCCGGCTGCCGGTCCTAGGAGGGCAATCGTCCTCATCGGCCGCCCCCGTTTCTATCAATCCGAATATGTTGCGAGTGGTGGTGGCTACATCAGAACACACTAATATCAGGGGTCGTGGGCGGTCGATCTGGGCTCGGCGCAGGTAGATAGGGGTTCAGTTGGAAGCGGACCGGTCGTAGGTCAGGGCAGACTCAATCCAGACTACCGTCTGGCTGAGCGATCAAAACTCTACT	.	PASS	SVTYPE=INS;SVLEN=260	.	1
gi|56160436|ref|AC_000005.1|	7563	sim_sv_indel_20	C	CCACGGCCGGTGAGCACCGTACAGACAACATGAGCTCCTGCCCCGTACATAGCAGAGTTCCGGCGATACACGGGCCTAACGCATGGGAGAGGGGGGTACCAAATATGTGAGTATTTGTACGCCGGGCGACGGGCGGTTCGACGGTTGACAACACCATGCCTGCTACCAAAACCTCGTTACGAACCTGGGTCGGCGTAACCCCTGGCG	.	PASS	SVTYPE=INS;SVLEN=206	.	1
gi|56160436|ref|AC_000005.1|	7599	sim_dup_10	G	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=70;END=7669;TARGETPOS=gi|56160436|ref|AC_000005.1|:7808	.	1
gi|56160436|ref|AC_000005.1|	7822	sim_inv_13	G	<INV>	.	PASS	SVTYPE=INV;END=7983;SVLEN=161	.	1
gi|56160436|ref|AC_000005.1|	7987	sim_inv_14	C	<INV>	.	PASS	SVTYPE=INV;END=8128;SVLEN=141	.	1
gi|56160436|ref|AC_000005.1|	8138	sim_sv_indel_21	T	TCGTGAAAGTTAGAACGTGCGTGTCCACATGACAAAAAGATAGGGACCCATCCCGTCGCTTCCACCCGTGCTGGTCTTTAACCTAGGGTGGCTCTGCGC	.	PASS	SVTYPE=INS;SVLEN=98	.	1
gi|56160436|ref|AC_000005.1|	8157	sim_sv_indel_22	C	CCCATAGGAACTGGGCTGAGCCGTGGAGAATAGTGGTCGTCCGGAACTGAAAACTCTGTAA	.	PASS	SVTYPE=INS;SVLEN=60	.	1
gi|56160436|ref|AC_000005.1|	8162	sim_dup_11	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=220;END=8382;TARGETPOS=gi|56160436|ref|AC_000005.1|:8404	.	1
gi|56160436|ref|AC_000005.1|	8430	sim_dup_12	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=130;END=8560;TARGETPOS=gi|56160436|ref|AC_000005.1|:8682	.	1
gi|56160436|ref|AC_000005.1|	8684	sim_sv_indel_23	A	AAGAGGGACGTATTTTGATTTCTAGGTCCTTCCTGAACTGGACAAAGGCTTATGTACAAAGCGCCGTCTATATGTAGCCAAACGAAGGATCTAACCTTGGATCCACATCCGGGCGGAGGCGGAGGTGGAGGTCACAACCTCACGGACCACGGAAATTCCGGCACCAGACGTGGACATACACAAGAATGTCGATTTGCCCAACTGTATGACTAACTCTAGGCCCTCGGCCAAGATAGTTCGGTGCAT	.	PASS	SVTYPE=INS;SVLEN=245	.	1
gi|56160436|ref|AC_000005.1|	8714	sim_sv_indel_24	T	TATGCCCCAAATTAGACCTAGTTTTCCCGATTATACGCGGCCGCACCGGTCCCATTACGAGAGAGGACTTCTCCGTGGCAGCGTACCTAGCGTCGTTCAGTGTGCCCTTGGCCCCAGGTTTCATTATCGGAGGTCGCTCGCCGCTCCCATGGCTGTATCTTTCCCCAGTGGCCTAGGGAAGAGCATCATTCCGCTTATCACTAGTCGATGGTTTATCACCAATGATAGGC	.	PASS	SVTYPE=INS;SVLEN=229	.	1
gi|56160436|ref|AC_000005.1|	8718	sim_sv_indel_25	T	TCTGCGTTTTATAACTAGAGGCCAGACATTGGTTAGAAAGGGTATTCTCGACAAGATTGTGAGCTACCCGACGATTCTCTGCTGGGTCTAGGGTAGAACGTCGGCGGCGTTGTCCGTCATGACGGACTGGGCCACCAGGTAATACCATCAGTAAAGGTTTCAAGCCACTGCAGCATTAGC	.	PASS	SVTYPE=INS;SVLEN=179	.	1
gi|56160436|ref|AC_000005.1|	8735	sim_inv_15	C	<INV>	.	PASS	SVTYPE=INV;END=8975;SVLEN=240	.	1
gi|56160436|ref|AC_000005.1|	9029	sim_inv_16	A	<INV>	.	PASS	SVTYPE=INV;END=9295;SVLEN=266	.	1
gi|56160436|ref|AC_000005.1|	9349	sim_dup_13	A	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=66;END=9415;TARGETPOS=gi|56160436|ref|AC_000005.1|:9624	.	1
gi|56160436|ref|AC_000005.1|	9683	sim_inv_17	G	<INV>	.	PASS	SVTYPE=INV;END=9706;SVLEN=23	.	1
gi|56160436|ref|AC_000005.1|	9738	sim_inv_18	G	<INV>	.	PASS	SVTYPE=INV;END=9759;SVLEN=21	.	1
gi|56160436|ref|AC_000005.1|	9809	sim_inv_19	C	<INV>	.	PASS	SVTYPE=INV;END=9986;SVLEN=177	.	1
gi|56160436|ref|AC_000005.1|	9996	sim_dup_14	G	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=33;END=10029;TARGETPOS=gi|56160436|ref|AC_000005.1|:10286	.	1
gi|56160436|ref|AC_000005.1|	10345	sim_sv_indel_26	C	CCATCTAGCTCCATCTTGACACAAACTGTCGGGGACCATCGCCGAATTGGTATCGATGTGGCATAACTGTAAATAGTTTTCAGAATCACGAGTCAGACTGTGGCGAGTCTCAGACCATTCCACTGAAGCACGGAGCTCCTAGGATTAGGACACAGACCGGAGCTCTTTAGGACGGCCTGCAAGGGTCATCGCCTGATCACCTTCCAGAACAAGGAATGAGATATCGGATACTACTAATGGGTCGATGGAAGTGAGAATCTG	.	PASS	SVTYPE=INS;SVLEN=260	.	1
gi|56160436|ref|AC_000005.1|	10385	sim_dup_15	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=144;END=10529;TARGETPOS=gi|56160436|ref|AC_000005.1|:10770	.	1
gi|56160436|ref|AC_000005.1|	10778	sim_sv_indel_27	ACATTCGGGGATTAGTTCTGCACGGGCCCATGTATCAGCAGCCAACTTAGTAACAGCATATGAACAAACGGTTACAGAGGAACGTAACTTTCAAAAAA	A	.	PASS	SVTYPE=DEL;SVLEN=-97	.	1
gi|56160436|ref|AC_000005.1|	10877	sim_inv_20	C	<INV>	.	PASS	SVTYPE=INV;END=11134;SVLEN=257	.	1
gi|56160436|ref|AC_000005.1|	11141	sim_sv_indel_28	GGCAGACAAGGTGGCCGCCATTAATTACTCCATGTTAAGTTTGGGAAAGTTTTATGCTCGTAAAATCTACAAAAGTCCGTATGTTCCCATTGACAAGGAAGTGAAGATAGACAGCTTTTATATGCGCATGGCTTTAAAGGTACTAACATTAAGCGACGATCTTGGAGTGTACCGCAATGACCGAATCCACAAAGCAGTAAGCGCCAGTCGCCGCAGAG	G	.	PASS	SVTYPE=DEL;SVLEN=-217	.	1
gi|56160436|ref|AC_000005.1|	11407	sim_sv_indel_29	G	GGGAACAGATATGGGCAGAGGTTCGGCCGGGCAAGGTCTGCATTCTTCAACTCCCACGGAAAAATCGCGGCACCCCAGGTACTGCTATATGCGAGACGCGGGTACCTAAGTACGGGTAAAGTATATTGACGTCTTATAAGCGCCTACCCAGTGGTCTACGTGAGCGGAGCACAAACGACCAGTCGAAATTTGCCTGTTCTTCTAGAGGCCGTTTGATTACGCAGAAAGAACTGATCTACGCCGAGTCGTC	.	PASS	SVTYPE=INS;SVLEN=249	.	1
gi|56160436|ref|AC_000005.1|	11483	sim_dup_16	G	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=266;END=11749;TARGETPOS=gi|56160436|ref|AC_000005.1|:11887	.	1
gi|56160436|ref|AC_000005.1|	11890	sim_dup_17	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=223;END=12113;TARGETPOS=gi|56160436|ref|AC_000005.1|:12225	.	1
gi|56160436|ref|AC_000005.1|	12249	sim_inv_21	G	<INV>	.	PASS	SVTYPE=INV;END=12530;SVLEN=281	.	1
gi|56160436|ref|AC_000005.1|	12553	sim_inv_22	C	<INV>	.	PASS	SVTYPE=INV;END=12605;SVLEN=52	.	1
gi|56160436|ref|AC_000005.1|	12661	sim_dup_18	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=228;END=12889;TARGETPOS=gi|56160436|ref|AC_000005.1|:12971	.	1
gi|56160436|ref|AC_000005.1|	13015	sim_inv_23	C	<INV>	.	PASS	SVTYPE=INV;END=13311;SVLEN=296	.	1
gi|56160436|ref|AC_000005.1|	13328	sim_inv_24	A	<INV>	.	PASS	SVTYPE=INV;END=13493;SVLEN=165	.	1
gi|56160436|ref|AC_000005.1|	13540	sim_sv_indel_30	ATTGTCACCGTTGTACGATACCACTCGAGTGTACTTGGTGGACAACAAGTCTTCTGACATTGCTTCATTGAATTACCAGAATGATCACAGCAACTTTTTAACCACTGTAGTGCAAAATAATGACTATTCCCCTATAGAGGCTGGCACGCAAACTATTAACTTTGATGAAAGGTCTAGATGGGGTGGAGATTTAAAAACCATCTTACATACCAACATGCCAAACGTGAACGATTTTATGTTTACCACCAAATTTAAGGCCAGGGTAATGGTGGCTAGGAAAACAAACAACGAAGGC	A	.	PASS	SVTYPE=DEL;SVLEN=-294	.	1
gi|56160436|ref|AC_000005.1|	13877	sim_sv_indel_31	GAGGGTAACTATTCGGAAACCATGACTATTGACTTAATGAACAATGCTATTATTGAGCATTATTTGCGAGTAGGAAGACAGCATGGAGTGCTGGAAAGTGACATTGGAGTTAAGTTTGACACCAGAAACTTTCGTCTGGGTTG	G	.	PASS	SVTYPE=DEL;SVLEN=-142	.	1
gi|56160436|ref|AC_000005.1|	14047	sim_inv_25	G	<INV>	.	PASS	SVTYPE=INV;END=14174;SVLEN=127	.	1
gi|56160436|ref|AC_000005.1|	14198	sim_dup_19	G	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=272;END=14470;TARGETPOS=gi|56160436|ref|AC_000005.1|:14572	.	1
gi|56160436|ref|AC_000005.1|	14580	sim_sv_indel_32	TTCATGCTAAAAGCTTCTACAACGAGCAAGCCGTCTACTCACAGCTTATTCGCCAGTCAACCGCGCTTACGCGCGTGTTTAATCGCTTTCCCGAGAACCAGATACTGGTGCGTCCACCAGCCGCTACCATCACTACCGTCAGTGAAAACGTTCCCGCCCTTACAGATCACGGGACCCTGCCGCTGCGTAGCAGTATCAGTGGAGTTCAGCGAGTCACCATCACTGACGCCCGCCGCCGGACCTGTCCCTACGTTTACAAAGCACTGGGCATAGTTTCTCCACGAGTGCTTTCTAGTCGCAC	T	.	PASS	SVTYPE=DEL;SVLEN=-300	.	1
gi|56160436|ref|AC_000005.1|	14939	sim_inv_26	G	<INV>	.	PASS	SVTYPE=INV;END=15036;SVLEN=97	.	1
gi|56160436|ref|AC_000005.1|	15061	sim_dup_20	A	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=253;END=15314;TARGETPOS=gi|56160436|ref|AC_000005.1|:15396	.	1
gi|56160436|ref|AC_000005.1|	15441	sim_sv_indel_33	A	ACGGCCCGAGTTGGATATCGCCTGGGAGAAGACATAATTGAACAGAACGCACTGGGGACGGCTGGCGATAGGACTCATTGTTGGAAGAAGAGCGTGGTTTCCTTGTCTTCATGCAGGGGCTAAGATACAAGCTCACAGTATATAAAGACAGCAGATACGTCAGTGAAATCTTTGTAATTACCAATTGATTAAAACAGACACTACACGAGTGGACCATTGAGATGTCGACGCCCACGCGGGCC	.	PASS	SVTYPE=INS;SVLEN=241	.	1
gi|56160436|ref|AC_000005.1|	15484	sim_inv_27	T	<INV>	.	PASS	SVTYPE=INV;END=15571;SVLEN=87	.	1
gi|56160436|ref|AC_000005.1|	15593	sim_dup_21	G	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=141;END=15734;TARGETPOS=gi|56160436|ref|AC_000005.1|:15982	.	1
gi|56160436|ref|AC_000005.1|	16054	sim_sv_indel_34	GCAAAAGTTAGAGGACGTACTAGAGCACATGAAGGTGGATCCTAGCGTACAGCCAGATGTAAAAGTACGTCCGATAAAAAAGGTAGCTCCAGGATTGGGAGTTCAAACAGTGGACATTCAAATTCCTGTGCAAACTGCATTGGGTGAAACTATGGAAATCCAAACTTCGCCAATAAAAACAACGGTGAACGCAAGCGTGCAAACAGACCCTTGGTACCCGCCAGTGCTTTCAACAAAAAAAAAGCGTCACTACA	G	.	PASS	SVTYPE=DEL;SVLEN=-253	.	1
gi|56160436|ref|AC_000005.1|	16424	sim_inv_28	C	<INV>	.	PASS	SVTYPE=INV;END=16628;SVLEN=204	.	1
gi|56160436|ref|AC_000005.1|	16713	sim_sv_indel_35	CACTTATTGCTGCGGCCATTGGAGCCGTTCCCGGAATTGCCTCAGTAGCCTTGCAGGCTTCTCGAAAAAATTAAAATAAAATAAAACTTCCAACTTATTA	C	.	PASS	SVTYPE=DEL;SVLEN=-99	.	1
gi|56160436|ref|AC_000005.1|	16838	sim_inv_29	A	<INV>	.	PASS	SVTYPE=INV;END=17017;SVLEN=179	.	1
gi|56160436|ref|AC_000005.1|	17021	sim_inv_30	A	<INV>	.	PASS	SVTYPE=INV;END=17238;SVLEN=217	.	1
gi|56160436|ref|AC_000005.1|	17249	sim_dup_22	A	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=165;END=17414;TARGETPOS=gi|56160436|ref|AC_000005.1|:17629	.	1
gi|56160436|ref|AC_000005.1|	17698	sim_sv_indel_36	A	ACAGTCCTAACAGTGAAAGCTTCAATTTCTGTGCACCAAGTTACGTACGCTAAAGCGTGCCTAGACTAGGCGGCATGGCCTCCGCACGAGCGCTTGTTGACGCAGTCAACGATGGGAACTAGACGTGTCTGAGCGCGCGCCCCGGGGAACACTACGCGAAAATCCAGTGCCTCGT	.	PASS	SVTYPE=INS;SVLEN=174	.	1
gi|56160436|ref|AC_000005.1|	17715	sim_sv_indel_37	CGCAGTCACCACCAGCGCTTTCAAGATGGCCACTCCCTCGATGATGCCGCAGTGGTCTTACATGCACATCGCCGGTCAGGATGCCTCGGAG	C	.	PASS	SVTYPE=DEL;SVLEN=-90	.	1
gi|56160436|ref|AC_000005.1|	17810	sim_inv_31	T	<INV>	.	PASS	SVTYPE=INV;END=17969;SVLEN=159	.	1
gi|56160436|ref|AC_000005.1|	17975	sim_sv_indel_38	CCTACAAGGCTCGCTTTACGCTGGCTGTGGGTGACAACCGCGTGTTAGACAT	C	.	PASS	SVTYPE=DEL;SVLEN=-51	.	1
gi|56160436|ref|AC_000005.1|	18032	sim_sv_indel_39	G	GACGGTTCCTACGCTAGTAGCCCATGTAAAAGGTGTTGCCGCTGCGGTATACCAATGTAA	.	PASS	SVTYPE=INS;SVLEN=59	.	1
gi|56160436|ref|AC_000005.1|	18047	sim_inv_32	T	<INV>	.	PASS	SVTYPE=INV;END=18127;SVLEN=80	.	1
gi|56160436|ref|AC_000005.1|	18160	sim_dup_23	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=207;END=18367;TARGETPOS=gi|56160436|ref|AC_000005.1|:18411	.	1
gi|56160436|ref|AC_000005.1|	18488	sim_inv_33	T	<INV>	.	PASS	SVTYPE=INV;END=18508;SVLEN=20	.	1
gi|56160436|ref|AC_000005.1|	18513	sim_dup_24	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=58;END=18571;TARGETPOS=gi|56160436|ref|AC_000005.1|:18752	.	1
gi|56160436|ref|AC_000005.1|	18790	sim_inv_34	T	<INV>	.	PASS	SVTYPE=INV;END=19043;SVLEN=253	.	1
gi|56160436|ref|AC_000005.1|	19063	sim_dup_25	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=83;END=19146;TARGETPOS=gi|56160436|ref|AC_000005.1|:19193	.	1
gi|56160436|ref|AC_000005.1|	19233	sim_inv_35	T	<INV>	.	PASS	SVTYPE=INV;END=19380;SVLEN=147	.	1
gi|56160436|ref|AC_000005.1|	19402	sim_sv_indel_40	GATGTAAACATGATTCTTCAGAGCACACTGGGAAATGATCTTCGGGTGGACGGAGCCAGCGTTCGCTTTGACAACATTGCCCTGTATGCTAACTTTTTTCCCATGGCACATAACACAGCTTCTACTTTAGAAGCCATGTTAAGAAATGACACCAACGACCAGTCTTTTAACGATTATTTGTGTGCTGCAAACATGCTGTATCCCATCCCAGCTAACGCCACCAGCGTGCCCA	G	.	PASS	SVTYPE=DEL;SVLEN=-231	.	1
gi|56160436|ref|AC_000005.1|	19638	sim_dup_26	A	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=71;END=19709;TARGETPOS=gi|56160436|ref|AC_000005.1|:19800	.	1
gi|56160436|ref|AC_000005.1|	19859	sim_sv_indel_41	C	CCTCTTTTGAGAGACAAGAAGGATAGTTTCCTATCACTGGTAGACTTGTCTGACGGTACTCTAACCTCCAGACGACCAAGCCGAACAGCGCCATTGGTTTGATATAACACATCTGAACTGCGCAACTGTCCGGCAACGGACTCAGCTGTGTCATTCGGCAACTACGTATCCCCAAACCGGGGAGGTCCCCCGATTGCACAAACACTAATATGTCGTCGACGTAAAAGCATTATAATGTGTCGATTGCCCTTAATAATCGTAACGGTCAAACTGATTCGCTCTTGATTGTAAAG	.	PASS	SVTYPE=INS;SVLEN=292	.	1
gi|56160436|ref|AC_000005.1|	19901	sim_dup_27	A	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=261;END=20162;TARGETPOS=gi|56160436|ref|AC_000005.1|:20255	.	1
gi|56160436|ref|AC_000005.1|	20334	sim_dup_28	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=269;END=20603;TARGETPOS=gi|56160436|ref|AC_000005.1|:20715	.	1
gi|56160436|ref|AC_000005.1|	20772	sim_sv_indel_42	TCTATCAGTTTGAGTACGAAAGTCTGTTGCGCCGTAGTGCGCTAGCGGCCACTAAAGACCGATGCGT	T	.	PASS	SVTYPE=DEL;SVLEN=-66	.	1
gi|56160436|ref|AC_000005.1|	20842	sim_sv_indel_43	C	CGGCTTGACTCAAGCCAGGCGCCTTAGAAATCAATCGTCCAGTTTAACATCTTTCCCAGTACCAAATGCTCCCTGATACCGCTGAAATTCAGCCAAAATAACGTCAACTGCAGACGAAGAGCACTAATTGATCCATAATACACCGGATTTTCGGCCAGAAGGGCCATCCCTGTTTAAATGTGACAGGCATGGCCTCCCATTCTACAGACTGTAAGGCATCCGGCG	.	PASS	SVTYPE=INS;SVLEN=224	.	1
gi|56160436|ref|AC_000005.1|	20857	sim_dup_29	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=146;END=21003;TARGETPOS=gi|56160436|ref|AC_000005.1|:21048	.	1
gi|56160436|ref|AC_000005.1|	21131	sim_sv_indel_44	AATGGACTCAAATAAACGTGTACACAATGCATTAATAATAAAACCATTTTATTAGCTCATTGGAGTACAAGCTTGACTGTTTTATTAAAAATCAAATGGCTCTTCGCGACAGTCGCCGTGGTTGGTGGGCAGGGATATGTTTCTGTACTGCAAACGCTGATGCCACTTGAATTCTGGAATAACAAG	A	.	PASS	SVTYPE=DEL;SVLEN=-185	.	1
gi|56160436|ref|AC_000005.1|	21461	sim_inv_36	A	<INV>	.	PASS	SVTYPE=INV;END=21497;SVLEN=36	.	1
gi|56160436|ref|AC_000005.1|	21507	sim_inv_37	T	<INV>	.	PASS	SVTYPE=INV;END=21753;SVLEN=246	.	1
gi|56160436|ref|AC_000005.1|	21786	sim_inv_38	A	<INV>	.	PASS	SVTYPE=INV;END=21865;SVLEN=79	.	1
gi|56160436|ref|AC_000005.1|	21893	sim_inv_39	T	<INV>	.	PASS	SVTYPE=INV;END=21945;SVLEN=52	.	1
gi|56160436|ref|AC_000005.1|	21958	sim_sv_indel_45	TAAGCTCCCCTTCGCGCTCGGTACACTTATGCTCCCACACGCAGCAACCGGTGGGTTCCCAGGAATTCTGTTGGACAC	T	.	PASS	SVTYPE=DEL;SVLEN=-77	.	1
gi|56160436|ref|AC_000005.1|	22106	sim_sv_indel_46	A	AACGCAAGACTGCGGACTACGGGGCCCAAGATTCAGCAGGGCATAATCACCCTGGCGGGTAATAGTACTGAAATTCAGTGGTGACGGTCACGCTCAGATATAGGAGCAACGCTTCTTGCAAATACTCTCGTACGCATCATTGCTGTAGCTACTTTACCGTTATTG	.	PASS	SVTYPE=INS;SVLEN=164	.	1
gi|56160436|ref|AC_000005.1|	22217	sim_inv_40	A	<INV>	.	PASS	SVTYPE=INV;END=22288;SVLEN=71	.	1
gi|56160436|ref|AC_000005.1|	22293	sim_dup_30	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=203;END=22496;TARGETPOS=gi|56160436|ref|AC_000005.1|:22773	.	1
gi|56160436|ref|AC_000005.1|	22812	sim_inv_41	C	<INV>	.	PASS	SVTYPE=INV;END=22924;SVLEN=112	.	1
gi|56160436|ref|AC_000005.1|	22984	sim_sv_indel_47	ATCGCTCTTCAATACCAGTTTCAATTGCAGAACTATCTTGCATCTACGAACGCAACCTGTTCTCCCCACGTGTGCCCCCTAAACGGCAAGCCAACGGCACA	A	.	PASS	SVTYPE=DEL;SVLEN=-100	.	1
gi|56160436|ref|AC_000005.1|	23123	sim_snp_0	T	A	.	PASS	.	.	1
gi|56160436|ref|AC_000005.1|	23136	sim_sv_indel_48	G	GAAGCGACTGATACATCTTGCACACATGATCCCTGATAGTGGTTCATCGAAGCTTCCGTAAGTTGTTGACGGGGCGCGATACTTCCGGCTGGTTGGTTATCCTGGGCGTGGCTTTATAATAATGTCTAGGAAACGGACTTACGAGTAAGAAACCGTTGACATCAGAACCGACTTGATGTCGCGGTTTTCAATGAGATCTTA	.	PASS	SVTYPE=INS;SVLEN=200	.	1
gi|56160436|ref|AC_000005.1|	23209	sim_sv_indel_49	C	CTACATATCGCTTGGTAATGCGAACTACCAAAGCCCAGTTTTGAACGTCTTTATGCGTGTGTTGGGGTTGAAATGGTAATTACTATTGCACAGCGCCTACCTTATGCATTCGGAGGCGACACTATTGGATCTC	.	PASS	SVTYPE=INS;SVLEN=132	.	1
gi|56160436|ref|AC_000005.1|	23221	sim_sv_indel_50	T	TCAAACTTGGACAAAATCGTGTTGTAGTGTGCATTTATGTTAGCGTATACAATGCCATGCGGTGACACTTGCAATGAATGGCCTATACGGAGTCCCTTCAATTGTGGCGCGGTCCGCGCCCTCTATTGAGACCGGATACACATC	.	PASS	SVTYPE=INS;SVLEN=143	.	1
gi|56160436|ref|AC_000005.1|	23224	sim_dup_31	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=224;END=23448;TARGETPOS=gi|56160436|ref|AC_000005.1|:23635	.	1
gi|56160436|ref|AC_000005.1|	23397	sim_snp_1	C	G	.	PASS	.	.	1
gi|56160436|ref|AC_000005.1|	23647	sim_dup_32	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=74;END=23721;TARGETPOS=gi|56160436|ref|AC_000005.1|:23952	.	1
gi|56160436|ref|AC_000005.1|	23972	sim_sv_indel_51	AAACCTTCGAGAACTAAACAAACTGTTAGACAGAGCACTAAAATCCCTATGGACCGGTTTTGACGAACGGACAGTAGCTGCAGAGCTAGCTGACATAATTTTCCCAGAAAGGTTAATGATAACCTTGCAAAACGGCTTGCCTGACTTTATGAGTCAAAGTATGCTGCACAATTATCGCTCTTTTATATTAGAGCGTTCTGGGATGCTTCCTAGCATGTGTTGTGCACTTCCTTCAGATTTTGTGCCTATATATTTTAGAGAGTGCCCCCCTCCCCTGTGGAGCCACTGCTA	A	.	PASS	SVTYPE=DEL;SVLEN=-290	.	1
gi|56160436|ref|AC_000005.1|	24271	sim_inv_42	G	<INV>	.	PASS	SVTYPE=INV;END=24453;SVLEN=182	.	1
gi|56160436|ref|AC_000005.1|	24482	sim_inv_43	C	<INV>	.	PASS	SVTYPE=INV;END=24630;SVLEN=148	.	1
gi|56160436|ref|AC_000005.1|	24677	sim_sv_indel_52	A	AGCCGGCTTCCCTACACCATGTTCGTATGTGTCA	.	PASS	SVTYPE=INS;SVLEN=33	.	1
gi|56160436|ref|AC_000005.1|	24729	sim_dup_33	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=51;END=24780;TARGETPOS=gi|56160436|ref|AC_000005.1|:24938	.	1
gi|56160436|ref|AC_000005.1|	24956	sim_dup_34	A	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=33;END=24989;TARGETPOS=gi|56160436|ref|AC_000005.1|:25013	.	1
gi|56160436|ref|AC_000005.1|	25052	sim_dup_35	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=145;END=25197;TARGETPOS=gi|56160436|ref|AC_000005.1|:25230	.	1
gi|56160436|ref|AC_000005.1|	25254	sim_sv_indel_53	CAGCCCCTTTGAAGAGCTCGACAAGGAACCGACCTGCAACAGCCAAGCGGCCCACTAGAATCGGCAACAGCAGCAACAAGGAAAGTCCTGAGGCGCGCGAGTTAAGAAAACGCATTTTTCCCACTTTATATGCTATTTTTCAGCAGAGTC	C	.	PASS	SVTYPE=DEL;SVLEN=-149	.	1
gi|56160436|ref|AC_000005.1|	25438	sim_dup_36	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=82;END=25520;TARGETPOS=gi|56160436|ref|AC_000005.1|:25768	.	1
gi|56160436|ref|AC_000005.1|	25776	sim_dup_37	G	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=24;END=25800;TARGETPOS=gi|56160436|ref|AC_000005.1|:26084	.	1
gi|56160436|ref|AC_000005.1|	26120	sim_sv_indel_54	CTCGTCAAGCCTACCTGACACTACAGAGCTCATCCTCAGCTCCGAGATCTGGTGGTATTGGAACTCTCCAATTT	C	.	PASS	SVTYPE=DEL;SVLEN=-73	.	1
gi|56160436|ref|AC_000005.1|	26199	sim_sv_indel_55	GGAATTTACTCCATCTGTTTACTTCAATCCTTTTTCGGGCTCGCCTGGACACTATCCTGACGCCTTCATACCCAACTTTGACGCAG	G	.	PASS	SVTYPE=DEL;SVLEN=-85	.	1
gi|56160436|ref|AC_000005.1|	26296	sim_sv_indel_56	G	GACGACCAACGTGCAATGGTATACGCTGCACAGATTGATATAAA	.	PASS	SVTYPE=INS;SVLEN=43	.	1
gi|56160436|ref|AC_000005.1|	26323	sim_dup_38	G	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=61;END=26384;TARGETPOS=gi|56160436|ref|AC_000005.1|:26683	.	1
gi|56160436|ref|AC_000005.1|	26796	sim_inv_44	A	<INV>	.	PASS	SVTYPE=INV;END=27085;SVLEN=289	.	1
gi|56160436|ref|AC_000005.1|	27130	sim_inv_45	A	<INV>	.	PASS	SVTYPE=INV;END=27263;SVLEN=133	.	1
gi|56160436|ref|AC_000005.1|	27293	sim_sv_indel_57	C	CCTTCTGTCATTGCATAGGCGAAACTCTCGTGCTTTTCTAAAGGAGATTAGAGGCTCTTATATTAGCCCTTAGGGTTACTTTTAGAAAAACGTAAATTAACGCCCCAACGGTGGCCTTTGTTCTTAACGATACGCACGGCAACCTGTCGAACAATCGGCTTGCTAC	.	PASS	SVTYPE=INS;SVLEN=165	.	1
gi|56160436|ref|AC_000005.1|	27333	sim_sv_indel_58	CCTGATTTCTAACTTGTTTCTAGTGCAACATTTGTATTCATACTAACAATGCTTTCCATTTTTCTTTTATTTCTCTTTTCTTTACCTTCTGG	C	.	PASS	SVTYPE=DEL;SVLEN=-91	.	1
gi|56160436|ref|AC_000005.1|	27426	sim_inv_46	T	<INV>	.	PASS	SVTYPE=INV;END=27626;SVLEN=200	.	1
gi|56160436|ref|AC_000005.1|	27652	sim_sv_indel_59	ACTGTGAAAATTATGACCTTAATCTGTTTTGGCTTAAGGTGGAAAATTCGGCTATTTACAACGTTAAAAATACAGTCAATGCTTCTGAAACAAATATTTACTATGATTTAAGAGTAGTACAAATTTTTCCACCTAAATGCATCATTACTTCAAAGTACCTTACAAACGATTATTGTCACATTACAATTAACTGCACTAACTCTGATTACCCCAATAAGGTTGTGTTTAATAATGTCAGTCGATGGTACTACGGATACGGTAAGGGCAGCCCAACCCTTCC	A	.	PASS	SVTYPE=DEL;SVLEN=-279	.	1
gi|56160436|ref|AC_000005.1|	27956	sim_inv_47	T	<INV>	.	PASS	SVTYPE=INV;END=28201;SVLEN=245	.	1
gi|56160436|ref|AC_000005.1|	28263	sim_dup_39	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=246;END=28509;TARGETPOS=gi|56160436|ref|AC_000005.1|:28552	.	1
gi|56160436|ref|AC_000005.1|	28581	sim_sv_indel_60	A	ATGCGTCCTAGCCACATTTACATCCGTCCTCTGGCGTAGTAAGTGCACAAAGCACCATATTATCCTCGAATAATCGGTCGGAGCTGGCTTGCCCTCAGCCGTGAATTTCTGCCGTGTGCAATCCATCATGAGGAGAACTGGAAC	.	PASS	SVTYPE=INS;SVLEN=143	.	1
gi|56160436|ref|AC_000005.1|	28622	sim_dup_40	A	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=203;END=28825;TARGETPOS=gi|56160436|ref|AC_000005.1|:28960	.	1
gi|56160436|ref|AC_000005.1|	28984	sim_dup_41	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=283;END=29267;TARGETPOS=gi|56160436|ref|AC_000005.1|:29337	.	1
gi|56160436|ref|AC_000005.1|	29348	sim_inv_48	A	<INV>	.	PASS	SVTYPE=INV;END=29387;SVLEN=39	.	1
gi|56160436|ref|AC_000005.1|	29391	sim_inv_49	T	<INV>	.	PASS	SVTYPE=INV;END=29524;SVLEN=133	.	1
gi|56160436|ref|AC_000005.1|	29571	sim_sv_indel_61	T	TCATCGCCGCCCGCTCATAGGGTGGAACTTACTACACGGAGTAGTCTTTTGCTCGATACATCTGGTCCATGATCTTACAAGTGGGGTTCACATCTCAAGTGATCGGGTCGACTGCCATATCCACGTCCGGCCTGACCCCAGCTATCTCTACATAGGTGGGATGAATGATTCAGGATTTCCGCAGGCTTTCGGCGTTTGGACCGTAAATACAATAAGCACTGGCAAGTGGGGTTCTTGGAATACAATGGCTTGAGCACCGTTCACGGCAGGGTATTTCGTATTCATATTCGTGTAAC	.	PASS	SVTYPE=INS;SVLEN=295	.	1
gi|56160436|ref|AC_000005.1|	29598	sim_sv_indel_62	A	AGAGTAATCTCTGCGTCGACATAGGGGCAAGTCAGGTAACAAAACCCGTTATCAGTATTTCACAGGGCCTCCTCCAGTCGCACCGAGATGCCAGCATCCATGTCAAAAAATACGCTGTGAAGCATAGGACCCACTCACGTAAAGGATGATATCGCCCATCGTAAGGTCTAAAGTG	.	PASS	SVTYPE=INS;SVLEN=174	.	1
gi|56160436|ref|AC_000005.1|	29614	sim_dup_42	C	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=234;END=29848;TARGETPOS=gi|56160436|ref|AC_000005.1|:30056	.	1
gi|56160436|ref|AC_000005.1|	30131	sim_inv_50	T	<INV>	.	PASS	SVTYPE=INV;END=30352;SVLEN=221	.	1
gi|56160436|ref|AC_000005.1|	30393	sim_sv_indel_63	T	TGTACTCTAACATTTGTTGGAAATCGGATTGCCAGAGCACCGTGTCACCACCTTCAGCGGTCTGACTTCGTCCCATCCCCCGAACAGTACAAACGGGTAGCTAATGCAAAAATTATAGTACTTACGAGCAGCACGCCTTGGGATCCTTGCATTCGGGGGGAACGCCATTTGATTCAGGGATGCAATAGATGATACGCCGTAATTGGCGCAATTTGGATGCGTGAGGGTCAGCGTCGTTTACGCGCGAGGAACGGCTTAAGCTGTGCCCAT	.	PASS	SVTYPE=INS;SVLEN=269	.	1
gi|56160436|ref|AC_000005.1|	30429	sim_dup_43	A	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=228;END=30657;TARGETPOS=gi|56160436|ref|AC_000005.1|:30819	.	1
gi|56160436|ref|AC_000005.1|	30834	sim_sv_indel_64	G	GACCGGCGTGTGGAGCAAGCATACGTTTGAGGGGTACAGCCCCCGTGCTGG	.	PASS	SVTYPE=INS;SVLEN=50	.	1
gi|56160436|ref|AC_000005.1|	30962	sim_sv_indel_65	C	CAATTCTGGCATCACACACTGCCCCTATGGATTTCCCGCAATAGGTTCCTAGAGTGCAACCTTGAAGGACCTCATTCTTACAATCAATCCTAAGTCGGTGACGTCTTTACACATGCTAGTACGGTTAACACACCGACGCTGGCCGCAAATCTGCTACAATAACTCAGTATTAATTGCATGTAGGACACG	.	PASS	SVTYPE=INS;SVLEN=188	.	1
gi|56160436|ref|AC_000005.1|	30964	sim_dup_44	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=167;END=31131;TARGETPOS=gi|56160436|ref|AC_000005.1|:31279	.	1
gi|56160436|ref|AC_000005.1|	31340	sim_sv_indel_66	G	GCCCTTGGATTAGTGCGGGCAGCGGGGTGGTGCCATACACACTGATAACGGACAAGTGGGACCAACTCATTCTTGTCAAGTTTAGAAGAGCAT	.	PASS	SVTYPE=INS;SVLEN=92	.	1
gi|56160436|ref|AC_000005.1|	31352	sim_dup_45	A	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=209;END=31561;TARGETPOS=gi|56160436|ref|AC_000005.1|:31770	.	1
gi|56160436|ref|AC_000005.1|	31807	sim_sv_indel_67	TGCTTCCCACATACATCACCTCTTTAGGCATTAAAT	T	.	PASS	SVTYPE=DEL;SVLEN=-35	.	1
gi|56160436|ref|AC_000005.1|	31875	sim_dup_46	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=157;END=32032;TARGETPOS=gi|56160436|ref|AC_000005.1|:32234	.	1
gi|56160436|ref|AC_000005.1|	32241	sim_dup_47	T	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=75;END=32316;TARGETPOS=gi|56160436|ref|AC_000005.1|:32611	.	1
gi|56160436|ref|AC_000005.1|	32648	sim_dup_48	A	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=64;END=32712;TARGETPOS=gi|56160436|ref|AC_000005.1|:32909	.	1
gi|56160436|ref|AC_000005.1|	32922	sim_inv_51	T	<INV>	.	PASS	SVTYPE=INV;END=33010;SVLEN=88	.	1
gi|56160436|ref|AC_000005.1|	33060	sim_dup_49	G	<DUP>	.	PASS	SVTYPE=DUP;SVLEN=146;END=33206;TARGETPOS=gi|56160436|ref|AC_000005.1|:33471	.	1
gi|56160436|ref|AC_000005.1|	33477	sim_inv_52	C	<INV>	.	PASS	SVTYPE=INV;END=33584;SVLEN=107	.	1
gi|56160436|ref|AC_000005.1|	33595	sim_sv_indel_68	A	AATTTTCTCAAGCGCGAACCTCGTTTACTGACCACTATTATCCTGGTCCGAAGCGTGGCTTAACCGGTGGCTATGCTTTTGATGTGTGATGACCCATTACTAAAAGTACTGAAAGTAGCCACGGTTTTGACCGCCCGGTGTCATACGGGATGGATGCTAGCCCAGCCCATGGGGATCACTAAGGTTCCTCCTAATAAAAACCAAAATAACTCTAACTTTTGGTAATGTCGGCCCGGTCCATTTGGGACGCGGCAAACCGTGGGTTCGGTTGT	.	PASS	SVTYPE=INS;SVLEN=271	.	1
gi|56160436|ref|AC_000005.1|	33623	sim_inv_53	T	<INV>	.	PASS	SVTYPE=INV;END=33843;SVLEN=220	.	1
gi|56160436|ref|AC_000005.1|	33857	sim_sv_indel_69	A	AATCTTAATCATCGCGAGTTGCCCGGGTGATATTTTTTCTGTGGCGACGACTTAGTGGGACCCACTTGTTATCAGGACTCGGGCCGCTCAGAATCGGCAATCGTCATCTAGTGAAGTTCCGAAAAATGGTGTGTGTTGAGATGAATCTGGTGGCTCACCAAAAGAAGGTAAGTACGGTAGAAAACAATCGATTGGCGCAAGAACGCAACGCGCAGGGAACACAACCTGCAGTGTGCAATGCCGGGAGACTCTTTAACATATCGTCTTTTCG	.	PASS	SVTYPE=INS;SVLEN=270	.	1
gi|56160436|ref|AC_000005.1|	33927	sim_sv_indel_70	G	GCGCAGTATTAGGTGATGGCTCGGAAGACTCGCATTCACACTAATGTGAGGAAATGGGATAGCTCAGGAGCGCGAAGAGCTCGAACCTAAATTCTGGAGAATGTCCGACGGTTCTGGCATGGGAACGTTGGGGAGTCGTTTTCGTGGACAAGAAACACCAATCATGTCGGACGATCGAAAAAGATCGGAGGGCCCCCCGTGGAGAACTGCACATGGTTCCCTGATAA	.	PASS	SVTYPE=INS;SVLEN=226	.	1
gi|56160436|ref|AC_000005.1|	33939	sim_inv_54	G	<INV>	.	PASS	SVTYPE=INV;END=34049;SVLEN=110	.	1
gi|56160436|ref|AC_000005.1|	34064	sim_sv_indel_71	CACTACGCCCACTTCATTTTAATATTGGCACTAGTCCA	C	.	PASS	SVTYPE=DEL;SVLEN=-37	.	1
