SeqCons
=======

__OPTIONS____________________________________________________________________

VERBOSITY              	NORMAL
OPERATION              	convert only

INPUT FILE             	seqs1.fa
OUTPUT READS           	seqs1.nop.sam
OUTPUT CONSENSUS       	seqs1.nop.fa

OVERLAP MIN LENGTH     	20
OVERLAP MAX ERR-RATE   	5
OVERLAP MIN COUNT      	3
OVERLAP WINDOW SIZE    	20

K-MER SIZE             	20
K-MER MAX OCCURRENCES  	200

REALIGNMENT BANDWIDTH  	10
REALIGNMENT ENVIRONMENT	20

__LOADING DATA_______________________________________________________________

Loading reads from seqs1.fa...OK

__COMPUTATION________________________________________________________________


__WRITING RESULT_____________________________________________________________

Writing consensus to seqs1.nop.fa ... OK
Writing alignments to seqs1.nop.sam ... OK

Overall time: 0.0055177 s

Done.  Have a nice day.
