fastq_to_fasta
A template for creation of SeqAn3 apps, with a FASTQ to FASTA example app.
Namespaces | Functions
insert_into_ibf.cpp File Reference
#include <seqan3/search/views/minimiser_hash.hpp>
#include <raptor/adjust_seed.hpp>
#include <raptor/build/hibf/insert_into_ibf.hpp>
#include <raptor/dna4_traits.hpp>

Namespaces

namespace  raptor
 
namespace  raptor::hibf
 Must be first include.
 

Functions

void raptor::hibf::insert_into_ibf (robin_hood::unordered_flat_set< size_t > &parent_kmers, robin_hood::unordered_flat_set< size_t > const &kmers, size_t const number_of_bins, size_t const bin_index, seqan3::interleaved_bloom_filter<> &ibf, bool is_root)
 
void raptor::hibf::insert_into_ibf (build_arguments const &arguments, chopper_pack_record const &record, seqan3::interleaved_bloom_filter<> &ibf)