fastq_to_fasta
A template for creation of SeqAn3 apps, with a FASTQ to FASTA example app.
one_indirect_error_model.hpp
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1// --------------------------------------------------------------------------------------------------
2// Copyright (c) 2006-2022, Knut Reinert & Freie Universität Berlin
3// Copyright (c) 2016-2022, Knut Reinert & MPI für molekulare Genetik
4// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5// shipped with this file and also available at: https://github.com/seqan/raptor/blob/main/LICENSE.md
6// --------------------------------------------------------------------------------------------------
7
8#pragma once
9
10#include <seqan3/search/kmer_index/shape.hpp>
11
12namespace raptor::threshold
13{
14
15[[nodiscard]] std::vector<double>
16one_indirect_error_model(size_t const pattern_size, size_t const window_size, seqan3::shape const shape);
17
18} // namespace raptor::threshold
Definition: forward_strand_minimiser.hpp:19
std::vector< double > one_indirect_error_model(size_t const pattern_size, size_t const window_size, seqan3::shape const shape)
Definition: one_indirect_error_model.cpp:17