Index

_

__init__() (mrcfile.future_mrcfile.FutureMrcFile method) (mrcfile.mrcfile.MrcFile method) (mrcfile.mrcinterpreter.MrcInterpreter method) (mrcfile.mrcobject.MrcObject method) _check_writeable() (mrcfile.mrcobject.MrcObject method) _close_data() (mrcfile.mrcmemmap.MrcMemmap method) (mrcfile.mrcobject.MrcObject method) _close_file() (mrcfile.gzipmrcfile.GzipMrcFile method) (mrcfile.mrcfile.MrcFile method) _create_default_attributes() (mrcfile.mrcobject.MrcObject method) _create_default_header() (mrcfile.mrcobject.MrcObject method) _ensure_readable_bzip2_stream() (mrcfile.bzip2mrcfile.Bzip2MrcFile method) _ensure_readable_gzip_stream() (mrcfile.gzipmrcfile.GzipMrcFile method) _get_file_size() (mrcfile.bzip2mrcfile.Bzip2MrcFile method) (mrcfile.gzipmrcfile.GzipMrcFile method) (mrcfile.mrcfile.MrcFile method) _get_result() (mrcfile.future_mrcfile.FutureMrcFile method) _open_file() (mrcfile.bzip2mrcfile.Bzip2MrcFile method) (mrcfile.gzipmrcfile.GzipMrcFile method) (mrcfile.mrcfile.MrcFile method)

_open_memmap() (mrcfile.mrcmemmap.MrcMemmap method) _read() (mrcfile.bzip2mrcfile.Bzip2MrcFile method) (mrcfile.gzipmrcfile.GzipMrcFile method) (mrcfile.mrcfile.MrcFile method) (mrcfile.mrcinterpreter.MrcInterpreter method) _read_bytearray_from_stream() (mrcfile.bzip2mrcfile.Bzip2MrcFile method) (mrcfile.mrcinterpreter.MrcInterpreter method) _read_data() (mrcfile.mrcfile.MrcFile method) (mrcfile.mrcinterpreter.MrcInterpreter method) (mrcfile.mrcmemmap.MrcMemmap method) _read_extended_header() (mrcfile.mrcinterpreter.MrcInterpreter method) _read_header() (mrcfile.mrcinterpreter.MrcInterpreter method) _run() (mrcfile.future_mrcfile.FutureMrcFile method) _set_new_data() (mrcfile.mrcmemmap.MrcMemmap method) (mrcfile.mrcobject.MrcObject method) _set_nstart() (mrcfile.mrcobject.MrcObject method) _set_voxel_size() (mrcfile.mrcobject.MrcObject method)

A

add_done_callback() (mrcfile.future_mrcfile.FutureMrcFile method)

B

byte_order_from_machine_stamp() (in module mrcfile.utils)

byte_orders_equal() (in module mrcfile.utils) Bzip2MrcFile (class in mrcfile.bzip2mrcfile)

C

cancel() (mrcfile.future_mrcfile.FutureMrcFile method) cancelled() (mrcfile.future_mrcfile.FutureMrcFile method)

close() (mrcfile.mrcfile.MrcFile method) (mrcfile.mrcinterpreter.MrcInterpreter method)

D

data (mrcfile.mrcobject.MrcObject property) data_dtype_from_header() (in module mrcfile.utils)

data_shape_from_header() (in module mrcfile.utils) done() (mrcfile.future_mrcfile.FutureMrcFile method) dtype_from_mode() (in module mrcfile.utils)

E

exception() (mrcfile.future_mrcfile.FutureMrcFile method)

extended_header (mrcfile.mrcobject.MrcObject property)

F

flush() (mrcfile.bzip2mrcfile.Bzip2MrcFile method) (mrcfile.gzipmrcfile.GzipMrcFile method) (mrcfile.mrcinterpreter.MrcInterpreter method) (mrcfile.mrcmemmap.MrcMemmap method)

FutureMrcFile (class in mrcfile.future_mrcfile)

G

get_ext_header_dtype() (in module mrcfile.dtypes)

GzipMrcFile (class in mrcfile.gzipmrcfile)

H

header (mrcfile.mrcobject.MrcObject property)

I

is_image_stack() (mrcfile.mrcobject.MrcObject method) is_single_image() (mrcfile.mrcobject.MrcObject method)

is_volume() (mrcfile.mrcobject.MrcObject method) is_volume_stack() (mrcfile.mrcobject.MrcObject method)

M

machine_stamp_from_byte_order() (in module mrcfile.utils) main() (in module mrcfile.validator) mmap() (in module mrcfile) (in module mrcfile.load_functions) mode_from_dtype() (in module mrcfile.utils) module mrcfile mrcfile.bzip2mrcfile mrcfile.command_line mrcfile.constants mrcfile.dtypes mrcfile.future_mrcfile mrcfile.gzipmrcfile mrcfile.load_functions mrcfile.mrcfile mrcfile.mrcinterpreter mrcfile.mrcmemmap mrcfile.mrcobject mrcfile.utils mrcfile.validator mrcfile module MrcFile (class in mrcfile.mrcfile) mrcfile.bzip2mrcfile module mrcfile.command_line module

mrcfile.constants module mrcfile.dtypes module mrcfile.future_mrcfile module mrcfile.gzipmrcfile module mrcfile.load_functions module mrcfile.mrcfile module mrcfile.mrcinterpreter module mrcfile.mrcmemmap module mrcfile.mrcobject module mrcfile.utils module mrcfile.validator module MrcInterpreter (class in mrcfile.mrcinterpreter) MrcMemmap (class in mrcfile.mrcmemmap) MrcObject (class in mrcfile.mrcobject)

N

new() (in module mrcfile) (in module mrcfile.load_functions) new_mmap() (in module mrcfile) (in module mrcfile.load_functions)

normalise_byte_order() (in module mrcfile.utils) nstart (mrcfile.mrcobject.MrcObject property)

O

open() (in module mrcfile) (in module mrcfile.load_functions)

open_async() (in module mrcfile) (in module mrcfile.load_functions)

P

pretty_machine_stamp() (in module mrcfile.utils)

print_header() (mrcfile.mrcobject.MrcObject method) print_headers() (in module mrcfile.command_line)

R

read() (in module mrcfile) (in module mrcfile.load_functions)

reset_header_stats() (mrcfile.mrcobject.MrcObject method) result() (mrcfile.future_mrcfile.FutureMrcFile method) running() (mrcfile.future_mrcfile.FutureMrcFile method)

S

set_data() (mrcfile.mrcobject.MrcObject method) set_extended_header() (mrcfile.mrcmemmap.MrcMemmap method) (mrcfile.mrcobject.MrcObject method)

set_image_stack() (mrcfile.mrcobject.MrcObject method) set_volume() (mrcfile.mrcobject.MrcObject method) spacegroup_is_volume_stack() (in module mrcfile.utils)

U

update_header_from_data() (mrcfile.mrcobject.MrcObject method)

update_header_stats() (mrcfile.mrcobject.MrcObject method)

V

validate() (in module mrcfile) (in module mrcfile.validator) (mrcfile.mrcfile.MrcFile method) (mrcfile.mrcobject.MrcObject method)

validate_all() (in module mrcfile.validator) voxel_size (mrcfile.mrcobject.MrcObject property)

W

write() (in module mrcfile) (in module mrcfile.load_functions)