Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Source: https://github.com/broadinstitute/picard/releases
Comment: Convenience binary jar files are removed.
Files-Excluded: gradle/wrapper/gradle-wrapper.jar
                *.bak

Files: *
Copyright: 2014-2024 Broad Institute
License: Expat

Files: etc/test/junit-noframes.xsl
Copyright: 2001-2004 The Apache Software Foundation
License: Apache-2.0

Files: gradlew
Copyright: 2015 the original author or authors
License: Apache-2.0

Files: src/main/java/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.java
       src/main/java/picard/vcf/FixVcfHeader.java
       src/test/java/picard/sam/DuplicationMetricsTest.java
       src/test/java/picard/sam/markduplicates/EstimateLibraryComplexityTest.java
       src/test/java/picard/vcf/ByIntervalListVariantContextIteratorTest.java
       src/test/java/picard/vcf/FixVcfHeaderTest.java
Copyright: 2015-2016 Nils Homer
License: Expat

Files: src/main/java/picard/util/IntervalListToBed.java
Copyright: 2016 Tim Fennell
License: Expat

Files: src/test/java/picard/analysis/MergeableMetricBaseTest.java
Copyright: 2016 Fulcrum Genomics
License: Expat

Files: src/test/java/picard/sam/FilterSamReadsTest.java
Copyright: 2016 Pierre Lindenbaum - Institut du Thorax
License: Expat

Files: debian/*
Copyright: 2010 Shaun Jackman <sjackman@debian.org>
           2013-2018 Olivier Sallou <osallou@debian.org>
           2015-2016 Vincent Danjean <vdanjean@debian.org>
           2016-2018 Andreas Tille <tille@debian.org>
           2021-2022 Pierre Gruet <pgt@debian.org>
License: ISC

License: ISC
 Permission to use, copy, modify, and/or distribute this software for any
 purpose with or without fee is hereby granted, provided that the above
 copyright notice and this permission notice appear in all copies.

License: Apache-2.0
 Licensed under the Apache License, Version 2.0 (the "License");
 you may not use this file except in compliance with the License.
 You may obtain a copy of the License at
 .
     http://www.apache.org/licenses/LICENSE-2.0
 .
 Unless required by applicable law or agreed to in writing, software
 distributed under the License is distributed on an "AS IS" BASIS,
 WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 See the License for the specific language governing permissions and
 limitations under the License.
Comment: On Debian systems, the complete text of the Apache License version 2.0
 is available in the file ‘/usr/share/common-licenses/Apache-2.0’.

License: Expat
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal
 in the Software without restriction, including without limitation the rights
 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
 copies of the Software, and to permit persons to whom the Software is
 furnished to do so, subject to the following conditions:
 .
 The above copyright notice and this permission notice shall be included in
 all copies or substantial portions of the Software.
 .
 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
 THE SOFTWARE.
