Date: 2025-03-29T05:58:51+00:00

Actual source code: dmplexts.c

      1: #include <petsc/private/dmpleximpl.h>
      2: #include <petsc/private/tsimpl.h>
      3: #include <petsc/private/snesimpl.h>
      4: #include <petscds.h>
      5: #include <petscfv.h>

      7: static PetscErrorCode DMTSConvertPlex(DM dm, DM *plex, PetscBool copy)
      8: {
      9:   PetscBool isPlex;

     11:   PetscFunctionBegin;
     12:   PetscCall(PetscObjectTypeCompare((PetscObject)dm, DMPLEX, &isPlex));
     13:   if (isPlex) {
     14:     *plex = dm;
     15:     PetscCall(PetscObjectReference((PetscObject)dm));
     16:   } else {
     17:     PetscCall(PetscObjectQuery((PetscObject)dm, "dm_plex", (PetscObject *)plex));
     18:     if (!*plex) {
     19:       PetscCall(DMConvert(dm, DMPLEX, plex));
     20:       PetscCall(PetscObjectCompose((PetscObject)dm, "dm_plex", (PetscObject)*plex));
     21:     } else {
     22:       PetscCall(PetscObjectReference((PetscObject)*plex));
     23:     }
     24:     if (copy) {
     25:       PetscCall(DMCopyDMTS(dm, *plex));
     26:       PetscCall(DMCopyDMSNES(dm, *plex));
     27:       PetscCall(DMCopyAuxiliaryVec(dm, *plex));
     28:     }
     29:   }
     30:   PetscFunctionReturn(PETSC_SUCCESS);
     31: }

     33: /*@
     34:   DMPlexTSComputeRHSFunctionFVM - Form the forcing `F` from the local input `locX` using pointwise functions specified by the user

     36:   Input Parameters:
     37: + dm   - The mesh
     38: . time - The time
     39: . locX - Local solution
     40: - user - The user context

     42:   Output Parameter:
     43: . F - Global output vector

     45:   Level: developer

     47: .seealso: [](ch_ts), `DMPLEX`, `TS`, `DMPlexComputeJacobianActionFEM()`
     48: @*/
     49: PetscErrorCode DMPlexTSComputeRHSFunctionFVM(DM dm, PetscReal time, Vec locX, Vec F, void *user)
     50: {
     51:   Vec          locF;
     52:   IS           cellIS;
     53:   DM           plex;
     54:   PetscInt     depth;
     55:   PetscFormKey key = {NULL, 0, 0, 0};

     57:   PetscFunctionBegin;
     58:   PetscCall(DMTSConvertPlex(dm, &plex, PETSC_TRUE));
     59:   PetscCall(DMPlexGetDepth(plex, &depth));
     60:   PetscCall(DMGetStratumIS(plex, "dim", depth, &cellIS));
     61:   if (!cellIS) PetscCall(DMGetStratumIS(plex, "depth", depth, &cellIS));
     62:   PetscCall(DMGetLocalVector(plex, &locF));
     63:   PetscCall(VecZeroEntries(locF));
     64:   PetscCall(DMPlexComputeResidual_Internal(plex, key, cellIS, time, locX, NULL, time, locF, user));
     65:   PetscCall(DMLocalToGlobalBegin(plex, locF, ADD_VALUES, F));
     66:   PetscCall(DMLocalToGlobalEnd(plex, locF, ADD_VALUES, F));
     67:   PetscCall(DMRestoreLocalVector(plex, &locF));
     68:   PetscCall(ISDestroy(&cellIS));
     69:   PetscCall(DMDestroy(&plex));
     70:   PetscCall(VecViewFromOptions(F, NULL, "-fv_rhs_view"));
     71:   PetscFunctionReturn(PETSC_SUCCESS);
     72: }

     74: /*@
     75:   DMPlexTSComputeBoundary - Insert the essential boundary values into the local input `locX` and/or its time derivative `locX_t` using pointwise functions specified by the user

     77:   Input Parameters:
     78: + dm     - The mesh
     79: . time   - The time
     80: . locX   - Local solution
     81: . locX_t - Local solution time derivative, or `NULL`
     82: - user   - The user context

     84:   Level: developer

     86: .seealso: [](ch_ts), `DMPLEX`, `TS`, `DMPlexComputeJacobianActionFEM()`
     87: @*/
     88: PetscErrorCode DMPlexTSComputeBoundary(DM dm, PetscReal time, Vec locX, Vec locX_t, void *user)
     89: {
     90:   DM       plex;
     91:   Vec      faceGeometryFVM = NULL;
     92:   PetscInt Nf, f;

     94:   PetscFunctionBegin;
     95:   PetscCall(DMTSConvertPlex(dm, &plex, PETSC_TRUE));
     96:   PetscCall(DMGetNumFields(plex, &Nf));
     97:   if (!locX_t) {
     98:     /* This is the RHS part */
     99:     for (f = 0; f < Nf; f++) {
    100:       PetscObject  obj;
    101:       PetscClassId id;

    103:       PetscCall(DMGetField(plex, f, NULL, &obj));
    104:       PetscCall(PetscObjectGetClassId(obj, &id));
    105:       if (id == PETSCFV_CLASSID) {
    106:         PetscCall(DMPlexGetGeometryFVM(plex, &faceGeometryFVM, NULL, NULL));
    107:         break;
    108:       }
    109:     }
    110:   }
    111:   PetscCall(DMPlexInsertBoundaryValues(plex, PETSC_TRUE, locX, time, faceGeometryFVM, NULL, NULL));
    112:   PetscCall(DMPlexInsertTimeDerivativeBoundaryValues(plex, PETSC_TRUE, locX_t, time, faceGeometryFVM, NULL, NULL));
    113:   PetscCall(DMDestroy(&plex));
    114:   PetscFunctionReturn(PETSC_SUCCESS);
    115: }

    117: /*@
    118:   DMPlexTSComputeIFunctionFEM - Form the local residual `locF` from the local input `locX` using pointwise functions specified by the user

    120:   Input Parameters:
    121: + dm     - The mesh
    122: . time   - The time
    123: . locX   - Local solution
    124: . locX_t - Local solution time derivative, or `NULL`
    125: - user   - The user context

    127:   Output Parameter:
    128: . locF - Local output vector

    130:   Level: developer

    132: .seealso: [](ch_ts), `DMPLEX`, `TS`, `DMPlexTSComputeRHSFunctionFEM()`
    133: @*/
    134: PetscErrorCode DMPlexTSComputeIFunctionFEM(DM dm, PetscReal time, Vec locX, Vec locX_t, Vec locF, void *user)
    135: {
    136:   DM       plex;
    137:   IS       allcellIS;
    138:   PetscInt Nds, s;

    140:   PetscFunctionBegin;
    141:   PetscCall(DMTSConvertPlex(dm, &plex, PETSC_TRUE));
    142:   PetscCall(DMPlexGetAllCells_Internal(plex, &allcellIS));
    143:   PetscCall(DMGetNumDS(dm, &Nds));
    144:   for (s = 0; s < Nds; ++s) {
    145:     PetscDS      ds;
    146:     IS           cellIS;
    147:     PetscFormKey key;

    149:     PetscCall(DMGetRegionNumDS(dm, s, &key.label, NULL, &ds, NULL));
    150:     key.value = 0;
    151:     key.field = 0;
    152:     key.part  = 0;
    153:     if (!key.label) {
    154:       PetscCall(PetscObjectReference((PetscObject)allcellIS));
    155:       cellIS = allcellIS;
    156:     } else {
    157:       IS pointIS;

    159:       key.value = 1;
    160:       PetscCall(DMLabelGetStratumIS(key.label, key.value, &pointIS));
    161:       PetscCall(ISIntersect_Caching_Internal(allcellIS, pointIS, &cellIS));
    162:       PetscCall(ISDestroy(&pointIS));
    163:     }
    164:     PetscCall(DMPlexComputeResidual_Internal(plex, key, cellIS, time, locX, locX_t, time, locF, user));
    165:     PetscCall(ISDestroy(&cellIS));
    166:   }
    167:   PetscCall(ISDestroy(&allcellIS));
    168:   PetscCall(DMDestroy(&plex));
    169:   PetscFunctionReturn(PETSC_SUCCESS);
    170: }

    172: /*@
    173:   DMPlexTSComputeIJacobianFEM - Form the Jacobian `Jac` from the local input `locX` using pointwise functions specified by the user

    175:   Input Parameters:
    176: + dm       - The mesh
    177: . time     - The time
    178: . locX     - Local solution
    179: . locX_t   - Local solution time derivative, or `NULL`
    180: . X_tShift - The multiplicative parameter for dF/du_t
    181: - user     - The user context

    183:   Output Parameters:
    184: + Jac  - the Jacobian
    185: - JacP - an additional approximation for the Jacobian to be used to compute the preconditioner (often is `Jac`)

    187:   Level: developer

    189: .seealso: [](ch_ts), `TS`, `DM`, `DMPlexTSComputeIFunctionFEM()`, `DMPlexTSComputeRHSFunctionFEM()`
    190: @*/
    191: PetscErrorCode DMPlexTSComputeIJacobianFEM(DM dm, PetscReal time, Vec locX, Vec locX_t, PetscReal X_tShift, Mat Jac, Mat JacP, void *user)
    192: {
    193:   DM        plex;
    194:   IS        allcellIS;
    195:   PetscBool hasJac, hasPrec;
    196:   PetscInt  Nds, s;

    198:   PetscFunctionBegin;
    199:   PetscCall(DMTSConvertPlex(dm, &plex, PETSC_TRUE));
    200:   PetscCall(DMPlexGetAllCells_Internal(plex, &allcellIS));
    201:   PetscCall(DMGetNumDS(dm, &Nds));
    202:   for (s = 0; s < Nds; ++s) {
    203:     PetscDS      ds;
    204:     IS           cellIS;
    205:     PetscFormKey key;

    207:     PetscCall(DMGetRegionNumDS(dm, s, &key.label, NULL, &ds, NULL));
    208:     key.value = 0;
    209:     key.field = 0;
    210:     key.part  = 0;
    211:     if (!key.label) {
    212:       PetscCall(PetscObjectReference((PetscObject)allcellIS));
    213:       cellIS = allcellIS;
    214:     } else {
    215:       IS pointIS;

    217:       key.value = 1;
    218:       PetscCall(DMLabelGetStratumIS(key.label, key.value, &pointIS));
    219:       PetscCall(ISIntersect_Caching_Internal(allcellIS, pointIS, &cellIS));
    220:       PetscCall(ISDestroy(&pointIS));
    221:     }
    222:     if (!s) {
    223:       PetscCall(PetscDSHasJacobian(ds, &hasJac));
    224:       PetscCall(PetscDSHasJacobianPreconditioner(ds, &hasPrec));
    225:       if (hasJac && hasPrec) PetscCall(MatZeroEntries(Jac));
    226:       PetscCall(MatZeroEntries(JacP));
    227:     }
    228:     PetscCall(DMPlexComputeJacobian_Internal(plex, key, cellIS, time, X_tShift, locX, locX_t, Jac, JacP, user));
    229:     PetscCall(ISDestroy(&cellIS));
    230:   }
    231:   PetscCall(ISDestroy(&allcellIS));
    232:   PetscCall(DMDestroy(&plex));
    233:   PetscFunctionReturn(PETSC_SUCCESS);
    234: }

    236: /*@
    237:   DMPlexTSComputeRHSFunctionFEM - Form the local residual `locG` from the local input `locX` using pointwise functions specified by the user

    239:   Input Parameters:
    240: + dm   - The mesh
    241: . time - The time
    242: . locX - Local solution
    243: - user - The user context

    245:   Output Parameter:
    246: . locG - Local output vector

    248:   Level: developer

    250: .seealso: [](ch_ts), `TS`, `DM`, `DMPlexTSComputeIFunctionFEM()`, `DMPlexTSComputeIJacobianFEM()`
    251: @*/
    252: PetscErrorCode DMPlexTSComputeRHSFunctionFEM(DM dm, PetscReal time, Vec locX, Vec locG, void *user)
    253: {
    254:   DM       plex;
    255:   IS       allcellIS;
    256:   PetscInt Nds, s;

    258:   PetscFunctionBegin;
    259:   PetscCall(DMTSConvertPlex(dm, &plex, PETSC_TRUE));
    260:   PetscCall(DMPlexGetAllCells_Internal(plex, &allcellIS));
    261:   PetscCall(DMGetNumDS(dm, &Nds));
    262:   for (s = 0; s < Nds; ++s) {
    263:     PetscDS      ds;
    264:     IS           cellIS;
    265:     PetscFormKey key;

    267:     PetscCall(DMGetRegionNumDS(dm, s, &key.label, NULL, &ds, NULL));
    268:     key.value = 0;
    269:     key.field = 0;
    270:     key.part  = 100;
    271:     if (!key.label) {
    272:       PetscCall(PetscObjectReference((PetscObject)allcellIS));
    273:       cellIS = allcellIS;
    274:     } else {
    275:       IS pointIS;

    277:       key.value = 1;
    278:       PetscCall(DMLabelGetStratumIS(key.label, key.value, &pointIS));
    279:       PetscCall(ISIntersect_Caching_Internal(allcellIS, pointIS, &cellIS));
    280:       PetscCall(ISDestroy(&pointIS));
    281:     }
    282:     PetscCall(DMPlexComputeResidual_Internal(plex, key, cellIS, time, locX, NULL, time, locG, user));
    283:     PetscCall(ISDestroy(&cellIS));
    284:   }
    285:   PetscCall(ISDestroy(&allcellIS));
    286:   PetscCall(DMDestroy(&plex));
    287:   PetscFunctionReturn(PETSC_SUCCESS);
    288: }

    290: /*@
    291:   DMTSCheckResidual - Check the residual of the exact solution

    293:   Input Parameters:
    294: + ts  - the `TS` object
    295: . dm  - the `DM`
    296: . t   - the time
    297: . u   - a `DM` vector
    298: . u_t - a `DM` vector
    299: - tol - A tolerance for the check, or -1 to print the results instead

    301:   Output Parameter:
    302: . residual - The residual norm of the exact solution, or `NULL`

    304:   Level: developer

    306: .seealso: [](ch_ts), `DM`, `DMTSCheckFromOptions()`, `DMTSCheckJacobian()`, `DNSNESCheckFromOptions()`, `DMSNESCheckDiscretization()`, `DMSNESCheckJacobian()`
    307: @*/
    308: PetscErrorCode DMTSCheckResidual(TS ts, DM dm, PetscReal t, Vec u, Vec u_t, PetscReal tol, PetscReal *residual)
    309: {
    310:   MPI_Comm  comm;
    311:   Vec       r;
    312:   PetscReal res;

    314:   PetscFunctionBegin;
    318:   if (residual) PetscAssertPointer(residual, 7);
    319:   PetscCall(PetscObjectGetComm((PetscObject)ts, &comm));
    320:   PetscCall(DMComputeExactSolution(dm, t, u, u_t));
    321:   PetscCall(VecDuplicate(u, &r));
    322:   PetscCall(TSComputeIFunction(ts, t, u, u_t, r, PETSC_FALSE));
    323:   PetscCall(VecNorm(r, NORM_2, &res));
    324:   if (tol >= 0.0) {
    325:     PetscCheck(res <= tol, comm, PETSC_ERR_ARG_WRONG, "L_2 Residual %g exceeds tolerance %g", (double)res, (double)tol);
    326:   } else if (residual) {
    327:     *residual = res;
    328:   } else {
    329:     PetscCall(PetscPrintf(comm, "L_2 Residual: %g\n", (double)res));
    330:     PetscCall(VecFilter(r, 1.0e-10));
    331:     PetscCall(PetscObjectCompose((PetscObject)r, "__Vec_bc_zero__", (PetscObject)dm));
    332:     PetscCall(PetscObjectSetName((PetscObject)r, "Initial Residual"));
    333:     PetscCall(PetscObjectSetOptionsPrefix((PetscObject)r, "res_"));
    334:     PetscCall(VecViewFromOptions(r, NULL, "-vec_view"));
    335:     PetscCall(PetscObjectCompose((PetscObject)r, "__Vec_bc_zero__", NULL));
    336:   }
    337:   PetscCall(VecDestroy(&r));
    338:   PetscFunctionReturn(PETSC_SUCCESS);
    339: }

    341: /*@
    342:   DMTSCheckJacobian - Check the Jacobian of the exact solution against the residual using the Taylor Test

    344:   Input Parameters:
    345: + ts  - the `TS` object
    346: . dm  - the `DM`
    347: . t   - the time
    348: . u   - a `DM` vector
    349: . u_t - a `DM` vector
    350: - tol - A tolerance for the check, or -1 to print the results instead

    352:   Output Parameters:
    353: + isLinear - Flag indicaing that the function looks linear, or `NULL`
    354: - convRate - The rate of convergence of the linear model, or `NULL`

    356:   Level: developer

    358: .seealso: [](ch_ts), `DNTSCheckFromOptions()`, `DMTSCheckResidual()`, `DNSNESCheckFromOptions()`, `DMSNESCheckDiscretization()`, `DMSNESCheckResidual()`
    359: @*/
    360: PetscErrorCode DMTSCheckJacobian(TS ts, DM dm, PetscReal t, Vec u, Vec u_t, PetscReal tol, PetscBool *isLinear, PetscReal *convRate)
    361: {
    362:   MPI_Comm     comm;
    363:   PetscDS      ds;
    364:   Mat          J, M;
    365:   MatNullSpace nullspace;
    366:   PetscReal    dt, shift, slope, intercept;
    367:   PetscBool    hasJac, hasPrec, isLin = PETSC_FALSE;

    369:   PetscFunctionBegin;
    373:   if (isLinear) PetscAssertPointer(isLinear, 7);
    374:   if (convRate) PetscAssertPointer(convRate, 8);
    375:   PetscCall(PetscObjectGetComm((PetscObject)ts, &comm));
    376:   PetscCall(DMComputeExactSolution(dm, t, u, u_t));
    377:   /* Create and view matrices */
    378:   PetscCall(TSGetTimeStep(ts, &dt));
    379:   shift = 1.0 / dt;
    380:   PetscCall(DMCreateMatrix(dm, &J));
    381:   PetscCall(DMGetDS(dm, &ds));
    382:   PetscCall(PetscDSHasJacobian(ds, &hasJac));
    383:   PetscCall(PetscDSHasJacobianPreconditioner(ds, &hasPrec));
    384:   if (hasJac && hasPrec) {
    385:     PetscCall(DMCreateMatrix(dm, &M));
    386:     PetscCall(TSComputeIJacobian(ts, t, u, u_t, shift, J, M, PETSC_FALSE));
    387:     PetscCall(PetscObjectSetName((PetscObject)M, "Preconditioning Matrix"));
    388:     PetscCall(PetscObjectSetOptionsPrefix((PetscObject)M, "jacpre_"));
    389:     PetscCall(MatViewFromOptions(M, NULL, "-mat_view"));
    390:     PetscCall(MatDestroy(&M));
    391:   } else {
    392:     PetscCall(TSComputeIJacobian(ts, t, u, u_t, shift, J, J, PETSC_FALSE));
    393:   }
    394:   PetscCall(PetscObjectSetName((PetscObject)J, "Jacobian"));
    395:   PetscCall(PetscObjectSetOptionsPrefix((PetscObject)J, "jac_"));
    396:   PetscCall(MatViewFromOptions(J, NULL, "-mat_view"));
    397:   /* Check nullspace */
    398:   PetscCall(MatGetNullSpace(J, &nullspace));
    399:   if (nullspace) {
    400:     PetscBool isNull;
    401:     PetscCall(MatNullSpaceTest(nullspace, J, &isNull));
    402:     PetscCheck(isNull, comm, PETSC_ERR_PLIB, "The null space calculated for the system operator is invalid.");
    403:   }
    404:   /* Taylor test */
    405:   {
    406:     PetscRandom rand;
    407:     Vec         du, uhat, uhat_t, r, rhat, df;
    408:     PetscReal   h;
    409:     PetscReal  *es, *hs, *errors;
    410:     PetscReal   hMax = 1.0, hMin = 1e-6, hMult = 0.1;
    411:     PetscInt    Nv, v;

    413:     /* Choose a perturbation direction */
    414:     PetscCall(PetscRandomCreate(comm, &rand));
    415:     PetscCall(VecDuplicate(u, &du));
    416:     PetscCall(VecSetRandom(du, rand));
    417:     PetscCall(PetscRandomDestroy(&rand));
    418:     PetscCall(VecDuplicate(u, &df));
    419:     PetscCall(MatMult(J, du, df));
    420:     /* Evaluate residual at u, F(u), save in vector r */
    421:     PetscCall(VecDuplicate(u, &r));
    422:     PetscCall(TSComputeIFunction(ts, t, u, u_t, r, PETSC_FALSE));
    423:     /* Look at the convergence of our Taylor approximation as we approach u */
    424:     for (h = hMax, Nv = 0; h >= hMin; h *= hMult, ++Nv);
    425:     PetscCall(PetscCalloc3(Nv, &es, Nv, &hs, Nv, &errors));
    426:     PetscCall(VecDuplicate(u, &uhat));
    427:     PetscCall(VecDuplicate(u, &uhat_t));
    428:     PetscCall(VecDuplicate(u, &rhat));
    429:     for (h = hMax, Nv = 0; h >= hMin; h *= hMult, ++Nv) {
    430:       PetscCall(VecWAXPY(uhat, h, du, u));
    431:       PetscCall(VecWAXPY(uhat_t, h * shift, du, u_t));
    432:       /* F(\hat u, \hat u_t) \approx F(u, u_t) + J(u, u_t) (uhat - u) + J_t(u, u_t) (uhat_t - u_t) = F(u) + h * J(u) du + h * shift * J_t(u) du = F(u) + h F' du */
    433:       PetscCall(TSComputeIFunction(ts, t, uhat, uhat_t, rhat, PETSC_FALSE));
    434:       PetscCall(VecAXPBYPCZ(rhat, -1.0, -h, 1.0, r, df));
    435:       PetscCall(VecNorm(rhat, NORM_2, &errors[Nv]));

    437:       es[Nv] = PetscLog10Real(errors[Nv]);
    438:       hs[Nv] = PetscLog10Real(h);
    439:     }
    440:     PetscCall(VecDestroy(&uhat));
    441:     PetscCall(VecDestroy(&uhat_t));
    442:     PetscCall(VecDestroy(&rhat));
    443:     PetscCall(VecDestroy(&df));
    444:     PetscCall(VecDestroy(&r));
    445:     PetscCall(VecDestroy(&du));
    446:     for (v = 0; v < Nv; ++v) {
    447:       if ((tol >= 0) && (errors[v] > tol)) break;
    448:       else if (errors[v] > PETSC_SMALL) break;
    449:     }
    450:     if (v == Nv) isLin = PETSC_TRUE;
    451:     PetscCall(PetscLinearRegression(Nv, hs, es, &slope, &intercept));
    452:     PetscCall(PetscFree3(es, hs, errors));
    453:     /* Slope should be about 2 */
    454:     if (tol >= 0) {
    455:       PetscCheck(isLin || PetscAbsReal(2 - slope) <= tol, comm, PETSC_ERR_ARG_WRONG, "Taylor approximation convergence rate should be 2, not %0.2f", (double)slope);
    456:     } else if (isLinear || convRate) {
    457:       if (isLinear) *isLinear = isLin;
    458:       if (convRate) *convRate = slope;
    459:     } else {
    460:       if (!isLin) PetscCall(PetscPrintf(comm, "Taylor approximation converging at order %3.2f\n", (double)slope));
    461:       else PetscCall(PetscPrintf(comm, "Function appears to be linear\n"));
    462:     }
    463:   }
    464:   PetscCall(MatDestroy(&J));
    465:   PetscFunctionReturn(PETSC_SUCCESS);
    466: }

    468: /*@C
    469:   DMTSCheckFromOptions - Check the residual and Jacobian functions using the exact solution by outputting some diagnostic information based on
    470:   values in the options database

    472:   Input Parameters:
    473: + ts - the `TS` object
    474: - u  - representative `TS` vector

    476:   Level: developer

    478:   Note:
    479:   The user must call `PetscDSSetExactSolution()` beforehand

    481:   Developer Notes:
    482:   What is the purpose of `u`, does it need to already have a solution or some other value in it?

    484: .seealso: `DMTS`
    485: @*/
    486: PetscErrorCode DMTSCheckFromOptions(TS ts, Vec u)
    487: {
    488:   DM        dm;
    489:   SNES      snes;
    490:   Vec       sol, u_t;
    491:   PetscReal t;
    492:   PetscBool check;

    494:   PetscFunctionBegin;
    495:   PetscCall(PetscOptionsHasName(((PetscObject)ts)->options, ((PetscObject)ts)->prefix, "-dmts_check", &check));
    496:   if (!check) PetscFunctionReturn(PETSC_SUCCESS);
    497:   PetscCall(VecDuplicate(u, &sol));
    498:   PetscCall(VecCopy(u, sol));
    499:   PetscCall(TSSetSolution(ts, u));
    500:   PetscCall(TSGetDM(ts, &dm));
    501:   PetscCall(TSSetUp(ts));
    502:   PetscCall(TSGetSNES(ts, &snes));
    503:   PetscCall(SNESSetSolution(snes, u));

    505:   PetscCall(TSGetTime(ts, &t));
    506:   PetscCall(DMSNESCheckDiscretization(snes, dm, t, sol, -1.0, NULL));
    507:   PetscCall(DMGetGlobalVector(dm, &u_t));
    508:   PetscCall(DMTSCheckResidual(ts, dm, t, sol, u_t, -1.0, NULL));
    509:   PetscCall(DMTSCheckJacobian(ts, dm, t, sol, u_t, -1.0, NULL, NULL));
    510:   PetscCall(DMRestoreGlobalVector(dm, &u_t));

    512:   PetscCall(VecDestroy(&sol));
    513:   PetscFunctionReturn(PETSC_SUCCESS);
    514: }