Changes: 2.3.1 — PETSc 3.17.4 documentation

# Changes: 2.3.1

General:

- -log_info is now just -info; PetscLogInfo…() is now PetscInfo…()

- Added TOPS solver components. [requires CCA tools like babel]

- Added supported for IBM BGL with optimzed fortran kernels

- bin/petscarch is removed. Use can give any name to PETSC_ARCH. [if not - configure picks a default name]

- PetscMap is no longer a public PETSc object

Vec:

- Changed prototypes for VecMDotBegin(), VecMDotEnd(), VecMTDotBegin(), VecMTDotEnd() to confirm with PETSc prototype style

- ISColoringCreate() takes another argument

Mat:

- MatScaleSystem() and MatUnscaleSystem() now take arguments b,x instead of x,b

- Added MatSeqAIJSetPreallocationCSR(), MatGetSubMatrixRaw()

- Added MatSolveTranspose() for superlu

- Added support for matrix types MATCSRPERM, MATCRL - for vector based machines.

- Added MatMatMult for seqdense

- Added MatRealPart, ImaginaryPart for AIJ, BAIJ, SBAIJ matrices

- Added MatGetRowUpperTriangular() to mpisbaij matrix

PC:

- PCPrometheusSetCoordinates() changed to PCSetCoordinates()

- Moved src/ksp/pc/pcimpl.h to include/petsc/private/pcimpl.h

- PCPreSolve() and PCPostSolve() now consistently take arguments b,x before sometimes they took x,b

- PCXXXSetYYY() and -pc_xxx_yyyy are now changed to PCFactorSetYYY() and -pc_factor_yyyy for XXX LU, ILU, Cholesky, and ICC

KSP:

- -ksp_view, -ksp_monitor now take an optional filename argument

- Added PetscLLAddPerm() to symbolic LU factorization

config/configure.py:

- Changed –with-64-bit-ints to –with-64-bit-indices

- config/configure.py now supports the arguments –with-precision=longdouble and –with-precision=int, these currently have limited functionality and certain things like binary IO does not work.

- Option –LIBS=<extra libs> for some broken compilers that require that require extra system libraries to be linked with

- Changed –with-fortran-kernels=<0,1> option to –with-fortran-kernels=<none,generic,bgl>

- Support –with-large-file-io=<bool> which indicates using files larger than 2GB

- –with-f90-header, –with-f90-source options merged into a single option - for eg: –with-f90-interface=intel8

- Added –with-is-color-value-type=<char,short>: char gives max of 256 colors, short gives max of 65536 colors

- Configure always tries to build libraries with PIC [or equivalent flag] To disable this, use: –with-pic=0

- Added –with-c-language-support for comiling PETSc with ‘c’ linkage - but with a c++ compiler.

- —download-mpich option now defaults to pm=gforker. To use mpd - use the additional option –download-mpich-pm=mpd

- –with-timer option is added [if the user knows MPI_Wtime() is accurate/low-overhead on a machine - then use: –with-timer=mpi]

SNES:

- -snes-view, -snes_monitor now take an optional filename argument

TS:

- -ts_view, -ts_monitor now take an optional filename argument

DA:

DMMG:

- Arguments to DMMGSetKSP() changed. Now the callback which forms the linear system matrix can optionally fill also an alternate matrix for the preconditioner.

SYS:

- PetscViewerFileType changed to PetscFileMode

- PetscViewerSetFileType() changed to PetscViewerFileSetMode()

Fortran:

- remove the special libpetscfortran.a [fortran interface & c interface now go into the same library]

- With some f90 compilers - PETSc datatypes [like PetscScalar,PetscInt] will use f90 KIND declaration - so if this code is in fixed form - there could be errors with lines exceeding 72 char limit

ExternalPackages:

- PLAPACK support added

- BLOPEX support added

- Updated Pvode interface to the newer Sundials package [configure option –download-sundials=1

- Added –download-mpe=1

- fblaslapack now has complete blas - as required by some external packages