Reference documentation for deal.II version 9.4.0
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dof_info.h
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15 
16 
17 #ifndef dealii_matrix_free_dof_info_h
18 #define dealii_matrix_free_dof_info_h
19 
20 
21 #include <deal.II/base/config.h>
22 
26 
31 
32 #include <array>
33 #include <memory>
34 
35 
37 
38 #ifndef DOXYGEN
39 
40 // forward declarations
41 
42 namespace internal
43 {
44  namespace MatrixFreeFunctions
45  {
46  template <int dim>
47  class HangingNodes;
48 
49  template <typename, typename>
50  struct FPArrayComparator;
51  } // namespace MatrixFreeFunctions
52 } // namespace internal
53 
54 template <typename>
55 class AffineConstraints;
56 
58 
59 template <typename>
60 class TriaIterator;
61 
62 template <int, int, bool>
63 class DoFCellAccessor;
64 
65 #endif
66 
67 namespace internal
68 {
69  namespace MatrixFreeFunctions
70  {
75  using compressed_constraint_kind = std::uint8_t;
76 
81  template <typename Number>
83  {
85 
93  template <typename number2>
94  unsigned short
96  const std::vector<std::pair<types::global_dof_index, number2>>
97  &entries);
98 
99  std::vector<std::pair<types::global_dof_index, double>>
101  std::vector<types::global_dof_index> constraint_indices;
102 
103  std::pair<std::vector<Number>, types::global_dof_index> next_constraint;
104  std::map<std::vector<Number>,
108  };
109 
128  struct DoFInfo
129  {
142  static const unsigned int chunk_size_zero_vector = 64;
143 
147  DoFInfo();
148 
152  DoFInfo(const DoFInfo &) = default;
153 
157  DoFInfo(DoFInfo &&) noexcept = default;
158 
162  ~DoFInfo() = default;
163 
167  DoFInfo &
168  operator=(const DoFInfo &) = default;
169 
173  DoFInfo &
174  operator=(DoFInfo &&) noexcept = default;
175 
179  void
180  clear();
181 
187  unsigned int
188  fe_index_from_degree(const unsigned int first_selected_component,
189  const unsigned int fe_degree) const;
190 
210  void
211  get_dof_indices_on_cell_batch(std::vector<unsigned int> &local_indices,
212  const unsigned int cell_batch,
213  const bool with_constraints = true) const;
214 
224  template <typename number>
225  void
227  const std::vector<types::global_dof_index> &local_indices_resolved,
228  const std::vector<types::global_dof_index> &local_indices,
229  const bool cell_has_hanging_nodes,
230  const ::AffineConstraints<number> & constraints,
231  const unsigned int cell_number,
232  ConstraintValues<double> & constraint_values,
233  bool & cell_at_boundary);
234 
239  template <int dim>
240  bool
242  const HangingNodes<dim> & hanging_nodes,
243  const std::vector<std::vector<unsigned int>> &lexicographic_mapping,
244  const unsigned int cell_number,
245  const TriaIterator<DoFCellAccessor<dim, dim, false>> &cell,
246  std::vector<types::global_dof_index> & dof_indices);
247 
255  void
256  assign_ghosts(const std::vector<unsigned int> &boundary_cells,
257  const MPI_Comm & communicator_sm,
258  const bool use_vector_data_exchanger_full);
259 
266  void
267  reorder_cells(const TaskInfo & task_info,
268  const std::vector<unsigned int> & renumbering,
269  const std::vector<unsigned int> & constraint_pool_row_index,
270  const std::vector<unsigned char> &irregular_cells);
271 
276  void
278  const std::vector<unsigned char> &irregular_cells);
279 
284  template <int length>
285  void
287  const std::vector<FaceToCellTopology<length>> &faces);
288 
294  void
295  make_connectivity_graph(const TaskInfo & task_info,
296  const std::vector<unsigned int> &renumbering,
297  DynamicSparsityPattern &connectivity) const;
298 
304  void
306  const Table<2, ShapeInfo<double>> & shape_info,
307  const unsigned int n_owned_cells,
308  const unsigned int n_lanes,
309  const std::vector<FaceToCellTopology<1>> &inner_faces,
310  const std::vector<FaceToCellTopology<1>> &ghosted_faces,
311  const bool fill_cell_centric,
312  const MPI_Comm & communicator_sm,
313  const bool use_vector_data_exchanger_full);
314 
320  void
322  std::array<std::vector<std::pair<unsigned int, unsigned int>>, 3>
323  &cell_indices_contiguous_sm);
324 
335  void
337  std::vector<types::global_dof_index> &renumbering);
338 
348  template <int length>
349  void
351  const TaskInfo & task_info,
352  const std::vector<FaceToCellTopology<length>> &faces);
353 
357  std::size_t
358  memory_consumption() const;
359 
364  template <typename StreamType>
365  void
366  print_memory_consumption(StreamType & out,
367  const TaskInfo &size_info) const;
368 
373  template <typename Number>
374  void
375  print(const std::vector<Number> & constraint_pool_data,
376  const std::vector<unsigned int> &constraint_pool_row_index,
377  std::ostream & out) const;
378 
390  enum class IndexStorageVariants : unsigned char
391  {
400  full,
412  interleaved,
421  contiguous,
445  interleaved_contiguous,
457  interleaved_contiguous_strided,
470  interleaved_contiguous_mixed_strides
471  };
472 
477  enum DoFAccessIndex : unsigned char
478  {
490  dof_access_cell = 2
491  };
492 
498  unsigned int dimension;
499 
508  unsigned int vectorization_length;
509 
517  std::array<std::vector<IndexStorageVariants>, 3> index_storage_variants;
518 
525  std::vector<std::pair<unsigned int, unsigned int>> row_starts;
526 
542  std::vector<unsigned int> dof_indices;
543 
548  std::vector<std::vector<bool>> hanging_node_constraint_masks_comp;
549 
554  std::vector<compressed_constraint_kind> hanging_node_constraint_masks;
555 
565  std::vector<std::pair<unsigned short, unsigned short>>
567 
571  std::vector<unsigned int> dof_indices_interleaved;
572 
581  std::array<std::vector<unsigned int>, 3> dof_indices_contiguous;
582 
591  std::array<std::vector<std::pair<unsigned int, unsigned int>>, 3>
593 
602  std::array<std::vector<unsigned int>, 3> dof_indices_interleave_strides;
603 
613  std::array<std::vector<unsigned char>, 3> n_vectorization_lanes_filled;
614 
621  std::shared_ptr<const Utilities::MPI::Partitioner> vector_partitioner;
622 
626  std::shared_ptr<
629 
649  std::array<
650  std::shared_ptr<
652  5>
654 
659  std::vector<unsigned int> constrained_dofs;
660 
665  std::vector<unsigned int> row_starts_plain_indices;
666 
675  std::vector<unsigned int> plain_dof_indices;
676 
682 
687  unsigned int n_base_elements;
688 
693  std::vector<unsigned int> n_components;
694 
699  std::vector<unsigned int> start_components;
700 
705  std::vector<unsigned int> component_to_base_index;
706 
718  std::vector<std::vector<unsigned int>> component_dof_indices_offset;
719 
723  std::vector<unsigned int> dofs_per_cell;
724 
728  std::vector<unsigned int> dofs_per_face;
729 
734 
738  std::vector<unsigned int> cell_active_fe_index;
739 
744  unsigned int max_fe_index;
745 
751  std::vector<std::vector<unsigned int>> fe_index_conversion;
752 
758  std::vector<types::global_dof_index> ghost_dofs;
759 
765  std::vector<unsigned int> vector_zero_range_list_index;
766 
770  std::vector<std::pair<unsigned int, unsigned int>> vector_zero_range_list;
771 
777  std::vector<unsigned int> cell_loop_pre_list_index;
778 
783  std::vector<std::pair<unsigned int, unsigned int>> cell_loop_pre_list;
784 
790  std::vector<unsigned int> cell_loop_post_list_index;
791 
796  std::vector<std::pair<unsigned int, unsigned int>> cell_loop_post_list;
797  };
798 
799 
800  /*-------------------------- Inline functions ---------------------------*/
801 
802 #ifndef DOXYGEN
803 
804 
805  inline unsigned int
806  DoFInfo::fe_index_from_degree(const unsigned int first_selected_component,
807  const unsigned int fe_degree) const
808  {
809  const unsigned int n_indices = fe_index_conversion.size();
810  if (n_indices <= 1)
811  return 0;
812  for (unsigned int i = 0; i < n_indices; ++i)
813  if (fe_index_conversion[i][first_selected_component] == fe_degree)
814  return i;
816  }
817 
818 #endif // ifndef DOXYGEN
819 
820  } // end of namespace MatrixFreeFunctions
821 } // end of namespace internal
822 
824 
825 #endif
#define DEAL_II_NAMESPACE_OPEN
Definition: config.h:442
#define DEAL_II_NAMESPACE_CLOSE
Definition: config.h:443
std::uint8_t compressed_constraint_kind
Definition: dof_info.h:75
static const unsigned int invalid_unsigned_int
Definition: types.h:201
Definition: types.h:32
unsigned int global_dof_index
Definition: types.h:76
std::vector< types::global_dof_index > constraint_indices
Definition: dof_info.h:101
std::map< std::vector< Number >, types::global_dof_index, FPArrayComparator< Number, VectorizedArray< Number > > > constraints
Definition: dof_info.h:107
unsigned short insert_entries(const std::vector< std::pair< types::global_dof_index, number2 >> &entries)
std::vector< std::pair< types::global_dof_index, double > > constraint_entries
Definition: dof_info.h:100
std::pair< std::vector< Number >, types::global_dof_index > next_constraint
Definition: dof_info.h:103
void print(const std::vector< Number > &constraint_pool_data, const std::vector< unsigned int > &constraint_pool_row_index, std::ostream &out) const
void reorder_cells(const TaskInfo &task_info, const std::vector< unsigned int > &renumbering, const std::vector< unsigned int > &constraint_pool_row_index, const std::vector< unsigned char > &irregular_cells)
Definition: dof_info.cc:296
std::vector< std::pair< unsigned short, unsigned short > > constraint_indicator
Definition: dof_info.h:566
std::vector< unsigned int > cell_loop_pre_list_index
Definition: dof_info.h:777
std::vector< std::pair< unsigned int, unsigned int > > row_starts
Definition: dof_info.h:525
std::vector< std::vector< unsigned int > > component_dof_indices_offset
Definition: dof_info.h:718
std::vector< std::vector< bool > > hanging_node_constraint_masks_comp
Definition: dof_info.h:548
void get_dof_indices_on_cell_batch(std::vector< unsigned int > &local_indices, const unsigned int cell_batch, const bool with_constraints=true) const
Definition: dof_info.cc:80
unsigned int fe_index_from_degree(const unsigned int first_selected_component, const unsigned int fe_degree) const
void compute_cell_index_compression(const std::vector< unsigned char > &irregular_cells)
Definition: dof_info.cc:528
std::vector< unsigned int > cell_loop_post_list_index
Definition: dof_info.h:790
std::vector< unsigned int > dofs_per_cell
Definition: dof_info.h:723
void compute_shared_memory_contiguous_indices(std::array< std::vector< std::pair< unsigned int, unsigned int >>, 3 > &cell_indices_contiguous_sm)
Definition: dof_info.cc:1210
void compute_dof_renumbering(std::vector< types::global_dof_index > &renumbering)
Definition: dof_info.cc:1436
static const unsigned int chunk_size_zero_vector
Definition: dof_info.h:142
std::shared_ptr< const internal::MatrixFreeFunctions::VectorDataExchange::Base > vector_exchanger
Definition: dof_info.h:628
std::vector< std::vector< unsigned int > > fe_index_conversion
Definition: dof_info.h:751
std::vector< unsigned int > dof_indices
Definition: dof_info.h:542
std::vector< std::pair< unsigned int, unsigned int > > vector_zero_range_list
Definition: dof_info.h:770
std::shared_ptr< const Utilities::MPI::Partitioner > vector_partitioner
Definition: dof_info.h:621
std::vector< compressed_constraint_kind > hanging_node_constraint_masks
Definition: dof_info.h:554
std::array< std::vector< unsigned int >, 3 > dof_indices_interleave_strides
Definition: dof_info.h:602
std::array< std::vector< std::pair< unsigned int, unsigned int > >, 3 > dof_indices_contiguous_sm
Definition: dof_info.h:592
std::vector< unsigned int > row_starts_plain_indices
Definition: dof_info.h:665
std::vector< unsigned int > dofs_per_face
Definition: dof_info.h:728
std::size_t memory_consumption() const
Definition: dof_info.cc:1494
std::vector< unsigned int > component_to_base_index
Definition: dof_info.h:705
std::vector< unsigned int > n_components
Definition: dof_info.h:693
void print_memory_consumption(StreamType &out, const TaskInfo &size_info) const
void assign_ghosts(const std::vector< unsigned int > &boundary_cells, const MPI_Comm &communicator_sm, const bool use_vector_data_exchanger_full)
Definition: dof_info.cc:153
std::vector< std::pair< unsigned int, unsigned int > > cell_loop_pre_list
Definition: dof_info.h:783
std::vector< types::global_dof_index > ghost_dofs
Definition: dof_info.h:758
void read_dof_indices(const std::vector< types::global_dof_index > &local_indices_resolved, const std::vector< types::global_dof_index > &local_indices, const bool cell_has_hanging_nodes, const ::AffineConstraints< number > &constraints, const unsigned int cell_number, ConstraintValues< double > &constraint_values, bool &cell_at_boundary)
std::array< std::vector< unsigned int >, 3 > dof_indices_contiguous
Definition: dof_info.h:581
void compute_tight_partitioners(const Table< 2, ShapeInfo< double >> &shape_info, const unsigned int n_owned_cells, const unsigned int n_lanes, const std::vector< FaceToCellTopology< 1 >> &inner_faces, const std::vector< FaceToCellTopology< 1 >> &ghosted_faces, const bool fill_cell_centric, const MPI_Comm &communicator_sm, const bool use_vector_data_exchanger_full)
Definition: dof_info.cc:860
DoFInfo(const DoFInfo &)=default
std::vector< unsigned int > cell_active_fe_index
Definition: dof_info.h:738
std::array< std::shared_ptr< const internal::MatrixFreeFunctions::VectorDataExchange::Base >, 5 > vector_exchanger_face_variants
Definition: dof_info.h:653
std::vector< unsigned int > plain_dof_indices
Definition: dof_info.h:675
std::array< std::vector< unsigned char >, 3 > n_vectorization_lanes_filled
Definition: dof_info.h:613
std::vector< unsigned int > start_components
Definition: dof_info.h:699
std::vector< unsigned int > dof_indices_interleaved
Definition: dof_info.h:571
std::vector< unsigned int > constrained_dofs
Definition: dof_info.h:659
std::array< std::vector< IndexStorageVariants >, 3 > index_storage_variants
Definition: dof_info.h:517
bool process_hanging_node_constraints(const HangingNodes< dim > &hanging_nodes, const std::vector< std::vector< unsigned int >> &lexicographic_mapping, const unsigned int cell_number, const TriaIterator< DoFCellAccessor< dim, dim, false >> &cell, std::vector< types::global_dof_index > &dof_indices)
void make_connectivity_graph(const TaskInfo &task_info, const std::vector< unsigned int > &renumbering, DynamicSparsityPattern &connectivity) const
Definition: dof_info.cc:1359
std::vector< unsigned int > vector_zero_range_list_index
Definition: dof_info.h:765
void compute_face_index_compression(const std::vector< FaceToCellTopology< length >> &faces)
void compute_vector_zero_access_pattern(const TaskInfo &task_info, const std::vector< FaceToCellTopology< length >> &faces)
std::vector< std::pair< unsigned int, unsigned int > > cell_loop_post_list
Definition: dof_info.h:796
DoFInfo(DoFInfo &&) noexcept=default