#!/bin/bash
set -e

pkg='busco'
CUR_DIR=`pwd`

QUILT_PATCHES=debian/patches quilt push -a || true

if [ "$AUTOPKGTEST_TMP" = "" ] ; then
  AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
  trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
fi

cd $AUTOPKGTEST_TMP

cp -a ${CUR_DIR}/test*/ .
mkdir -p config
cp -a /usr/share/doc/${pkg}/examples/config.ini config/

echo -e "\e[93m\e[1mTEST 1\e[0m"

for py in $(py3versions -s 2> /dev/null)
do
    echo "Testing with $py in $(pwd):"
    $py -m unittest tests/unittest_runner.py -v 
    
done

cd ${CUR_DIR}
QUILT_PATCHES=debian/patches quilt pop -a || true

echo -e "\e[92m\e[1mPASS\e[0m"

echo -e "\e[93m\e[1mTEST 2\e[0m"

cd $AUTOPKGTEST_TMP
mkdir -p busco_downloads/lineages/bacteria_odb10
cp -a ${CUR_DIR}/debian-tests-data/* busco_downloads/lineages/bacteria_odb10
cp -a /usr/share/doc/${pkg}/examples/genome.fna .
busco -i genome.fna -l bacteria_odb10 -o output -m genome --offline

echo -e "\e[92m\e[1mPASS\e[0m"
rm -rf output
